KEGG   Erigeron canadensis (horseweed): 122584255
Entry
122584255         CDS       T07610                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03020  RNA polymerase
ecad03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    122584255
  09124 Replication and repair
   03420 Nucleotide excision repair
    122584255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ecad03021]
    122584255
   03400 DNA repair and recombination proteins [BR:ecad03400]
    122584255
Transcription machinery [BR:ecad03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     122584255
DNA repair and recombination proteins [BR:ecad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      122584255
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 122584255
NCBI-ProteinID: XP_043612404
LinkDB
Position
Unknown
AA seq 191 aa
MFDEKFETNGNGNNDSAFAKGDKGKGGKGEKGGVSSKKEPPALVLKVEEEIPENAECLMD
CEAAQILQGIQDHMVLLSKDPTIKIPSSFDRALQYATRTNPYTDPHSVRQILESLKNLGV
SDGEMCVIANTAIETSGEAFGLLPSLKLQFNVFVVFQAKKSKVKEPLKSALTELKKVKHA
TESTRDAIVLD
NT seq 576 nt   +upstreamnt  +downstreamnt
atgtttgatgaaaagttcgaaacgaatggaaacgggaacaatgattccgctttcgctaaa
ggtgataagggcaaaggggggaagggagaaaagggaggtgtcagttcaaagaaagagcct
cctgcgcttgtgctcaaggttgaagaggagattcctgaaaatgccgagtgtttgatggac
tgcgaagctgcacaaatcttgcaaggaattcaagaccatatggtgctactgtccaaggat
ccaacaatcaaaatccctagttcctttgacagggcattgcagtatgccaccaggaccaat
ccttacactgatcctcattcggttagacagatattggaatctctcaagaacctaggtgtt
tctgatggcgagatgtgtgtcattgcaaatactgcgattgaaacttctggtgaagctttt
ggtctcttgccatcattgaagctgcagtttaatgtttttgtggtattccaggctaagaaa
agcaaggtaaaggaacccttgaaaagtgcgttgactgaactgaagaaggttaaacatgct
acagagagcaccagagacgccatagtgcttgattga

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