Erigeron canadensis (horseweed): 122584471
Help
Entry
122584471 CDS
T07610
Name
(RefSeq) methyl-CpG-binding domain-containing protein 9-like
KO
K22768
methyl-CpG-binding domain-containing protein 9 [EC:
2.3.1.48
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecad03036
]
122584471
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
122584471
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
122584471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHIM1
PHD
WSD
FYRN
FYRC
MBD
PHD-1st_NSD
Bromodomain
PHDvar_NSD
SMUBP-2_HCS1_1B
Motif
Other DBs
NCBI-GeneID:
122584471
NCBI-ProteinID:
XP_043612564
LinkDB
All DBs
Position
Unknown
AA seq
1725 aa
AA seq
DB search
MVVCVKHFHVKCLGSKNSHQQEEEKEEVEEIEWRCAKCSMKCRSKKKLRRSVSAGGVVVG
SDSGLLRVFDMNASPPKDFDDDDDVVAENVVNSQLDLAAKKMQDRLGNPFVGCTSTSSYP
PTDMQTARLNLDIATQNAILVYSQALKDYISERRGVLGDGWHVKFDYSESFCKSFPNYCA
PDGSRFKSMPEVAHYLGLSSGGDLTNENSNSVGLQQNGSHATPIDINDGSRSLSRVINAG
NDVMGNANHGSESFLDGFPVQFENFFVTSIGKIDQRPPFHNTSQIWPIGYRSIWHDKLTG
SLFIFNILDGGDRGPIFRVNRYPCTKQSIPNPSTVIYKPKCGPTDEISNCLMTQSAFSFQ
ESQHLPSNNFKNGDLIGEFSVEGRSPSSAWKMALETLLLACHQAFQDIKVLEFFCNHSIE
SQHCSDSYNIDSLDRFGCLSGQVNSIPSLILNTEQLEVSCMTLRRWLQMDRFGLDAEFVQ
ELIEKLPEVADCSEYKSLDVRCQSSIVHTVKSGFFSVLRKYHSQPMVSDSLTESGRRLGP
PGNAVASNVPPSLMGNVLQAYEFCLRFYDVLGQEAPLSRQTLEYELLNPCVGGFNLLKTG
SIKLHEGNNIEDLISSAAVHPDAAKESEGVGSQSLLTNFHMAMLKVIVEDILAKVVISEP
SGAMESKARKGRKRNADMNMSHKKISIGLFPVTEITWPELARRYILASLSMDGNLEELDI
TSREFVEVFRCLNGDGGPLCGSLKGMAAIEADAMVLAEASKKVFSSVKSKVVDFIIDKNE
LKINNSSIESKRSASKCLDWIKVLEPIRKQPTNVGAKIRNQVKLSLGLSPPEWAAKMLLE
SISKEVYKGNAAGPTKKIVVEVLEKVRTENPQTQKKSKESHDVRTVSDVIMKRCRMVLRA
VAAENTNKSIFGPMAESLLKPHEFDDVASTATVSRPLDFRIIDLRLDAGFYGYSHESFIE
DVREVWQNLRMAYRNYPKYLDLIDSVSKNLENLYEQEVLTFISKTIEYTNSPSAFSDDLK
NELYKMVADTIMNTLFVAPWEDRICKVCGKDENDHILLLCDRCDAEYHTYCLDPPLQRIP
KSSWYCPPCIAFITSQPPKKKEIQREFTRNDLEALVDLADNMKSKEYWELGVQERTFLLQ
FLCDEALSSTLIRNHISADNCDRNRNYLGQDSAGRIYWVLGQPERLFVSGPHREDDVCVA
SGGSSSGESDSWNCYELDVEIEALVEWLRDDDARENMLKETIINWQRSKANDQNGQFDLQ
VNPSRSSVYCTNSRAALEKKFGSVLGAIRDYEGRILQQGKVYRCDCLELVESTRQHCFSC
HSTFFSNEVHQCDGPLKLKDAVDTLGKQFTLTNGLVLSNENPLSVSKDSLQDNNNESSCE
AGMSNTKSIGGKIPSTSRTLAGRAAEIFSCLKVILLDIEAALPREAFRPSRGDPDKLRGW
RAFLKSAQSIYEMVQATIILEDMIKSEHLKRDWWYWSSPSAAAKISTVSSLALQIYALDA
AIYYEKPPSPPPVDLTEPIVQEDSKAKRETPKKSNLKNNSKASNSTMVALFNDLEPSKIS
NSKIKRKKKKVEVMAPHDASICHEKPPPLWPVDPTEQLSKGEAPKLSNPKNHPKPNSSTM
AGMSNDLEPFKISGSRDKPKKKKLKVSVLHDAGIFNEMMPRPPLVYPIEPEHLKPKGEAF
KESIPQNNPKPSNSKMAVVPNDPEPSKFLSFKNKARKKKLEVSSD
NT seq
5178 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgtgtgtaaaacactttcatgtcaagtgtttaggaagtaaaaatagtcatcaa
caagaagaagaaaaagaagaagtagaagaaattgagtggaggtgcgccaagtgttcgatg
aaatgccgcagtaagaaaaaattgcgcagaagtgtttctgctggtggtgttgttgttggt
tcggattcgggtttattaagggttttcgatatgaatgcttctccacctaaagattttgat
gatgatgatgatgttgttgctgaaaatgttgtgaattctcagctggatttggctgccaaa
aaaatgcaggataggctaggtaacccatttgttggatgcacttcaacttcttcataccct
cctacagatatgcaaactgcacggttgaatcttgatattgcaacacaaaatgcaatttta
gtatattcacaagcacttaaagactacatatctgagagacgaggtgtgctaggagatggt
tggcatgtaaaatttgattattcagaaagtttctgcaaatcttttccaaattattgtgct
cctgatggaagcagatttaaatcaatgccagaagttgctcattatcttggtttatcatcc
ggcggtgacttgacaaacgaaaacagtaatagcgttggattacaacaaaatggatcgcat
gctactcctatagatataaatgatggttcaaggtcactaagcagggttattaatgctgga
aatgatgtgatggggaatgctaaccatgggtcagagtcgtttcttgatgggtttccagtt
cagtttgaaaacttctttgttacgtcaattggaaaaatcgaccaacggcctccattccac
aacacctcccagatctggcccatcggttacagatccatctggcatgataagcttaccggg
tcccttttcatattcaatattttagacggcggtgatcgtggcccaatattcagagtaaac
cggtatccatgtacaaaacagtcaatcccaaatccttcaacagtgatctacaagccaaaa
tgtgggccgactgatgagatatccaactgtttgatgacacaatctgcattctcttttcaa
gagagtcaacacttgccttctaataacttcaaaaacggcgatctaattggcgagttttct
gtagaggggagatcaccgtcatctgcatggaaaatggctttagaaactttactacttgca
tgccaccaagcttttcaagatataaaagtcttagaatttttctgtaatcatagtattgaa
agtcaacactgttctgattcatataatattgattcactagacagatttggctgtctgtct
ggtcaagttaacagcatcccaagcttaatcttaaatacagagcaacttgaagtttcttgt
atgacgctgaggagatggttacaaatggacagatttggtttggatgcagaatttgttcaa
gagctcattgaaaagcttcctgaggttgcagattgttcagaatataagtcattggatgtc
agatgtcaaagttcgattgttcatactgttaaaagcggatttttttccgttcttaggaaa
tatcattcacagccaatggtatcagacagtctcacggaaagtggcagaagactcggtcca
cctggcaacgcagttgcctcgaatgttcctccaagtttaatggggaatgtgctccaggcc
tatgagttctgcttgcgattttatgatgtattgggtcaagaggcacctctctctcgacag
actctggaatatgagttattgaatccgtgcgttggtggttttaatttactgaagactgga
agcattaagctgcatgaaggcaacaatatagaagatcttatctcatctgctgcagttcac
cctgatgcagcaaaagaatctgagggagttggttctcaatcactattaacaaactttcac
atggcaatgctaaaggtgatagtggaagatatactggcaaaagttgttattagtgaacct
tctggtgccatggaatccaaagcgaggaaaggtagaaagagaaatgcggatatgaatatg
tctcacaaaaagataagtattggtctatttcctgttactgagattacatggccagaatta
gccagaagatatattttggcttcattgtccatggatggcaatcttgaagagttagatatc
acgagccgtgagttcgttgaagttttccgctgcttaaatggtgatggcggtccactttgt
ggttctctcaagggaatggctgcaatcgaggctgatgcaatggttttagctgaggcatca
aagaaagttttttcttctgtgaagagtaaagttgtcgacttcattatagataaaaatgaa
cttaaaattaacaactcttccatagaatccaagagatctgcttctaaatgccttgattgg
attaaggttctagaaccgattagaaagcaaccgacaaatgtgggagcaaaaataagaaac
caagtcaaattatcattaggcctcagtccacccgagtgggcagcaaagatgttgttagag
tctataagcaaagaagtctacaagggtaatgcagcgggacccacaaagaaaattgtagtt
gaggttcttgagaaagtgagaactgaaaatccccaaactcagaagaaatcaaaagaaagt
catgatgtaaggactgtatctgatgtcataatgaaacgttgtcgtatggtgctgcgtgct
gttgctgctgaaaatacaaacaaatccatttttggtcccatggcagaatctctcttgaaa
cctcatgaatttgatgatgttgcaagtactgcgacagtttcacgaccgttggatttccgg
atcattgatcttagattggatgcgggattctatggttattcacatgaatctttcattgag
gatgttcgtgaggtttggcaaaatttacgtatggcatatcggaactatcctaagtatctt
gacttgattgactcagtttctaaaaatctcgaaaatctgtatgaacaagaggtactcaca
ttcatctccaaaaccatcgagtatacaaattctcccagcgcattctctgatgatttaaag
aatgagctatacaaaatggttgcagacactatcatgaacacactttttgttgctccatgg
gaagacagaatttgtaaagtgtgtggaaaggatgaaaacgatcatatcttgctcctttgt
gatagatgtgatgctgaatatcatacatactgtttagatcctccacttcaaaggatccca
aaatcaagttggtattgccctccttgtatcgctttcattacaagtcaacccccgaagaag
aaggaaattcagagagagtttactagaaatgatttagaggcgttggtggatttagcagat
aatatgaagtcaaaggagtattgggaactaggtgttcaggagaggactttccttttacaa
ttcttgtgcgacgaggcattaagttcgactcttattcggaatcacattagcgcagataat
tgtgatcgtaataggaactacttgggccaagattcggctggaagaatatactgggttctt
ggccagcccgaaaggctgtttgtttctggcccacatagagaagatgatgtttgtgtagcc
tctgggggttcttcatctggagaatctgattcttggaattgctatgaattggatgttgaa
attgaggctctggttgaatggctgagagatgacgatgcaagagagaacatgttaaaagaa
acgattataaattggcaaagaagcaaagcaaatgatcaaaatggtcaattcgatttgcag
gttaatccctccagatcatctgtttattgcacaaattcaagggcagcattggaaaagaag
tttggttcagttttaggagcaattagagattatgagggtagaattctccaacaggggaaa
gtatacaggtgtgattgcttggaattagtggagtctactcggcaacactgtttctcatgc
cactcgacattttttagtaatgaggtgcatcaatgtgatggtcctttaaaattgaaagac
gctgtagatactcttgggaagcagtttactttgactaatgggctggttttgtcaaatgaa
aacccattatctgtttccaaagattctcttcaagataataacaatgagtcatcatgtgag
gctggcatgtcaaacactaaaagtataggtggaaaaattccctctacttccagaacatta
gctgggagagctgctgaaatcttttcttgtctaaaagttattttactggatatcgaagcc
gctcttcctagagaagcttttagaccgtcaagaggagacccagataaattacgaggttgg
cgggcatttcttaaatcggcacaatcaatttatgagatggtacaagcaactattatccta
gaggacatgatcaaatccgagcacctgaaaagggattggtggtattggtcctcgccttca
gcagcagctaaaatctcaacggtttcttctctcgctttacaaatctatgcccttgatgcc
gccatctattatgagaagccaccttcaccacctcctgtagatcttacagagcctatagtt
caagaagattccaaggcaaagagagaaacaccaaagaagtcaaacctgaagaataactca
aaggcaagcaactcaacaatggtggcactgtttaatgatctagaaccctctaaaatctca
aattctaaaattaaacggaagaaaaagaaagttgaagttatggctccccatgatgcatcc
atctgtcacgagaagccacctccgctttggcccgtggacccaacagagcagctctcaaag
ggagaagctcccaaattgtcaaaccccaaaaaccacccaaagccaaacagctcaacaatg
gcggggatgtctaatgatttggaaccctttaagatttcaggttccagagacaaaccgaag
aaaaagaagcttaaagtttcagttctccatgatgctggcatctttaatgagatgatgcct
cgaccgccactggtataccctatagagccagaacatttgaagccaaagggagaagctttc
aaagagtcaataccccaaaacaacccaaagccaagcaactcaaaaatggcggtagtgccg
aatgatccagaaccgtctaaatttttaagtttcaaaaacaaagcaagaaaaaagaagctt
gaagtttcaagtgattaa
DBGET
integrated database retrieval system
