KEGG   Erigeron canadensis (horseweed): 122584617
Entry
122584617         CDS       T07610                                 
Name
(RefSeq) LOW QUALITY PROTEIN: photosystem II CP43 reaction center protein-like
  KO
K02705  photosystem II CP43 chlorophyll apoprotein
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad00195  Photosynthesis
ecad01100  Metabolic pathways
Module
ecad_M00161  Photosystem II
ecad_M00611  Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09100 Metabolism
  09102 Energy metabolism
   00195 Photosynthesis
    122584617
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   00194 Photosynthesis proteins [BR:ecad00194]
    122584617
Photosynthesis proteins [BR:ecad00194]
 Photosystem and electron transport system
  Photosystem II (P680 chlorophyll a) [OT]
   Main subunits
    122584617
SSDB
Motif
Pfam: PSII Photo_RC
Other DBs
NCBI-GeneID: 122584617
NCBI-ProteinID: XP_043612606
LinkDB
Position
Unknown
AA seq 809 aa
MTIALGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY
THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF
RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ
AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNLFNGTLALA
GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQ
GLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESF
PFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTL
SPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL
VWSGEAYLSYSLAAISVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRL
GANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDI
QPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFFFVGHLWH
AGRARAAAAGFEKGIDRDFEPVLSMTPLN
NT seq 2430 nt   +upstreamnt  +downstreamnt
atgactatagcccttggtaaatttaccaaagacgaaaatgatttgtttgatattatggat
gactggttacgtagggaccgtttcgtttttgtaggctggtccggcttattgctctttcct
tgtgcctatttcgctgtagggggttggttcacgggtacaacctttgtaacttcatggtat
acccatggattggccagttcctatttggaaggctgcaatttcttaactgctgcggtttct
actcctgctaatagtttagcacattctttattattactatggggtcctgaagcacaagga
gattttactcgttggtgtcaattaggcggtctgtggacttttgttgctctccacggtgct
ttcggactaataggtttcatgttacgtcaattcgaacttgctcgatctgttcaattgcgc
ccttataatgcaatcgcattctctggtccaattgccgtttttgtttctgtattcctgatt
tatccactaggtcagtctggttggttctttgcgcctagttttggtgtagcagctatattt
cgatttatcctcttttttcaaggatttcataactggacattgaacccatttcatatgatg
ggagttgctggtgtattgggcgctgctttgctatgcgctattcatggtgctactgtagaa
aatactttatttgaagatggtgatggcgcaaatacattccgtgcttttaacccaactcaa
gctgaagaaacttattcaatggtcaccgctaatcgcttttggtcccaaatctttggggtt
gctttttccaataaacgttggttacatttctttatgttatttgtaccggtaactggttta
tggatgagtgctcttggagtagtcggtttggccttgaacctacgtgcctatgacttcgtt
tctcaggaaattcgcgcggcggaagatcctgaatttgagactttctacaccaaaaatatt
ctattaaacgaaggtattcgtgcttggatggcggctcaagatcagcctcatgaaaacctt
atattccctgaggaggttctaccccgtggaaacctctttaatggaactttagctttagct
ggtcgtgaccaagaaaccactggtttcgcttggtgggccgggaatgcccggcttatcaat
ttatctggtaaactactaggggctcatgtagcccatgctggattaatcgtattctgggcc
ggagcaatgaatctttttgaagtggctcatttcgtaccagagaagcctatgtatgaacaa
ggattaattttacttccccacctagctactttaggttggggggtaggtcctggtggggaa
gttatagatacttttccatactttgtatctggagtacttcatttaatttcctctgcagta
ttgggctttggcggtatttatcatgcacttttaggacctgagacacttgaagaatctttc
ccattcttcggttatgtatggaaagatagaaataaaatgaccacaattttaggtattcac
ttaatcttgttaggtataggtgcttttcttctagtattcaaagctctttattttgggggc
gtatatgatacttgggctccgggaggaggagatgtaagaaaaatcaccaacttgacgctt
agcccaagtatcatatttggttatttactaaaatcgccctttgggggggaaggctggatt
gttagtgtagacgatttggaagatataatcggtggccatgtatggttaggttccatttgt
atacttggtggaatttggcatatcttaaccaaacccttcgcatgggctcgacgcgcactt
gtatggtctggagaggcttacttatcttatagtttggcggctatatctgtctttggtttc
attgcttgttgttttgtctggttcaataatacggcttatcctagtgagttttacggaccc
actggaccagaagcttctcaagcccaagcatttacttttctagttagagaccaacgtctt
ggagcgaatgtgggatctgctcaagggcctaccggtttaggtaaatatttaatgcgttcc
ccgaccggagaagtcatttttggaggagaaactatgcgtttttgggatctgcgtgctcct
tggttagaacctctaaggggtccaaatggcttggatttgagtcggctgaaaaaagacata
caaccttggcaagaacgtcgttccgcagaatatatgactcatgctcctttgggttcttta
aattccgtgggtggagtagctaccgagatcaatgcagtcaattatgtgtctcctagaagt
tggttagctacttctcattttgttctaggattcttcttcttcgtagggcatttgtggcac
gcaggaagagctcgtgcagctgcagcaggatttgaaaaaggaattgatcgtgattttgaa
cctgttctttccatgaccccccttaattga

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