KEGG   Erigeron canadensis (horseweed): 122584752
Entry
122584752         CDS       T07610                                 
Name
(RefSeq) U6 snRNA phosphodiesterase
  KO
K23093  U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
ecad  Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ecad03041]
    122584752
Spliceosome [BR:ecad03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    122584752
SSDB
Motif
Pfam: HVSL 2_5_RNA_ligase2
Other DBs
NCBI-GeneID: 122584752
NCBI-ProteinID: XP_043612742
LinkDB
Position
1:27571683..27575568
AA seq 283 aa
MEALVASYGDTSSDSESDSTPPVTAADPSPPPVTLPPPPIDLLNPPNSLGNFDFLERNTE
NRIRSFPHIDGNYALHVYIPVVIPSERKKELALFLKKATSFVPGLHVVDIDVPLHILVKD
DEKLVQAALGREFHISLGRTVPIRVHQIDSVVAMLRQKLQFQKRYLINFDKWEVFVNDDQ
TRTFLSVEITTGGLAEVTKQIQGVNEVYKLHNLPEFYKDPRPHISIAWAVGDISQSLQRA
VEGEMRKYNLGGSSSRSMFTCKFGNIVCKVGNKTYNICGSQGQ
NT seq 852 nt   +upstreamnt  +downstreamnt
atggaggcactagtggcatcgtacggagacacttcctccgattccgaatcagattccacg
ccaccagttaccgccgccgacccatcaccaccgccagtcactcttccaccgccgccaatc
gaccttctcaacccaccaaattcactaggaaattttgattttttggagagaaatacagaa
aatagaattcgaagctttcctcatattgatggcaactatgctttacatgtttatatccca
gtcgttataccatccgaaagaaagaaggagctggccctgtttttgaagaaagccacatca
tttgtaccaggacttcatgttgtagatattgatgttccactacatatactggtaaaagac
gatgagaagctagtacaagctgccttggggagggaatttcatattagtcttggaagaacg
gttccgatacgtgtgcatcagatagattcagtagttgcaatgcttcgtcagaagcttcag
tttcaaaaacggtatttgattaattttgataagtgggaggtctttgtcaatgatgatcag
acacgcacgtttctttcagttgagattacaaccggtggcctagctgaggtaacgaaacag
attcaaggtgttaatgaggtttataagttgcacaatcttcctgaattttacaaggatcct
cgacctcatatatctatagcttgggctgttggtgatatcagtcaatctctacagagagca
gtcgaaggagaaatgaggaaatacaatcttggaggatcatcatcgaggtctatgtttacc
tgcaaattcggtaatattgtttgtaaagtaggtaataaaacctataatatatgcggatct
caaggacaatga

DBGET integrated database retrieval system