Erigeron canadensis (horseweed): 122584780
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Entry
122584780 CDS
T07610
Name
(RefSeq) transcription factor-like protein DPB
KO
K04683
transcription factor Dp-1
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122584780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecad03000
]
122584780
03036 Chromosome and associated proteins [BR:
ecad03036
]
122584780
Transcription factors [BR:
ecad03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
122584780
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
122584780
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
122584780
NCBI-ProteinID:
XP_043612774
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Position
1:53646075..53651401
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AA seq
347 aa
AA seq
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MGSNDNPENVAGNSTKNQFSGSSRGGGGGTRSGQSVSTSGSAGSPSTRSDVAMAATPASE
NTFLRLNHLDIHAEDAGSQVASAATAGSKTKKRAQRATGGDKGGRGLRQFSMKVCEKVES
KGRTTYNEVADELVAEFSDPRNGDQPPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKE
IQWRGLPRTSLNDIEELKSERLALKNRVDKKAAYLRELEDQHVGLQNLIKRNEELYSSGN
APNGGVALPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKLSDGSN
DIPREGGVGSSMSAMIQPASFPPPRSTRPPPSPPLPGILKGRVKSEH
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgggatccaatgataatccggaaaatgtggctggaaattcaacaaaaaaccagttttca
gggagttcaagaggaggagggggtggaacccggtcgggtcaatccgtttccacaagtggc
agtgctgggtcaccgtcgacccggagtgacgtggcaatggcggctacacctgctagtgag
aatacttttttgaggttgaatcatcttgatattcatgctgaagatgctggatctcaagtg
gcttctgctgctaccgctggtagcaagacaaaaaaacgagctcaacgtgcaactggaggg
gacaaaggtggtagaggacttcgccagtttagtatgaaagtgtgcgagaaagttgaaagc
aagggaagaaccacttataacgaggttgcagatgaacttgtggctgaattttcagatcct
cgaaatggtgatcaacctcccgaccagcaacaatatgatgagaagaatattcgtcgacgg
gtatatgatgcattaaatgttctcatggctatggatattatttctaaagataaaaaggaa
atacaatggcgaggtctccctagaactagtttgaacgatattgaggagttaaagagtgag
cgtcttgctctcaagaacagagtcgacaaaaaagctgcttatttgcgagaactggaagat
caacatgtaggtcttcaaaatctaataaaacggaacgaagagttatatagctcgggcaat
gcaccaaatggtggagtggctttacctttcatattggtccagacccgtcctcatgccact
gtcgaagtggaaatttcagaagatatgcagcttgttcattttgacttcaacagtacacct
tttgagctacacgatgacaattatgttctcaaggccatgaagttaagtgatggatcaaac
gatattcccagagagggaggtgtaggatccagcatgtcagccatgattcagcctgcctcg
tttcccccaccaaggtccaccagaccacctccctcgcctccacttccaggcatattaaag
ggacgtgttaagtcggagcattag
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