Erigeron canadensis (horseweed): 122584791
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Entry
122584791 CDS
T07610
Name
(RefSeq) long chain acyl-CoA synthetase 4-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00061
Fatty acid biosynthesis
ecad00071
Fatty acid degradation
ecad01100
Metabolic pathways
ecad01212
Fatty acid metabolism
ecad04146
Peroxisome
Module
ecad_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
122584791
00071 Fatty acid degradation
122584791
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122584791
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ecad01004
]
122584791
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecad04147
]
122584791
Enzymes [BR:
ecad01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
122584791
Lipid biosynthesis proteins [BR:
ecad01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
122584791
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of breast milk
122584791
Exosomal proteins of breast cancer cells
122584791
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
UPF0150
Motif
Other DBs
NCBI-GeneID:
122584791
NCBI-ProteinID:
XP_043612785
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All DBs
Position
1:48931195..48938019
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AA seq
659 aa
AA seq
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MEQKKYIIEVEPGIEAKDGRPSMGPVYRSIFAKDGFPPPIDGLDSCWDIFRMSAEKYPDN
KMLGTREFVDGKHGKYVWMTYKEVYDKVIQAGNAIRACGVEPGGKCGIYGVNCAAWIMSM
EACNAHGLHCIPLYDTLGAGAVEFIIGHAEVSIAFVEEKKIPELLKAFPNAGQYLKTIVS
FGQVTPEQKEQVKNFGSAIHSWDEFLALGKDKNFDLPVKKKTDICTIMYTSGTTGDPKGV
LISNNSIVTLIAGVRRLLESANESLSADDVYLSFLPLAHIFGRVIEECFIHHGGSIGFWR
GDVKLLTDDIGELKPTIFCAVPRVLDRIYSGLQQKITSGSFFKNKLFNLAYSYKLYNMKG
GSKHEEASVLSDKLVFGKVKQGLGGRVRIILSGAAPLAPHVEGFLKVVACCHVLQGYGLT
ETCAGSFVSLPNEMSMLGTVGPPVPNLDARLESVPEMNYDALSSTPQGEICIRGGTLFSG
YYKREDLTEEVLIDGWFHTGDIGEWQPDGSMKVIDRKKNIFKLAQGEYVAVENLENVYAL
VPAVDEVWVYGNSFESCLVTVVNPNKNAFESWAKTNDVSGDFDSLCQNPKAKEYILGELT
RIGKEKKLKGFEFIKAVHLDHVPFDIERDLLTPTLKKKRPQMQKYYQSIIDDMYKSMKQ
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaagaaatatatcatagaagttgaacccggcatcgaggccaaagatggacgt
ccatcgatgggacctgtttatcgtagtatctttgcgaaagatggttttccgcctcccatt
gatggtttggattcctgttgggatattttccgcatgtcagcagaaaaatatccagataac
aagatgcttggcactcgtgaatttgtagacgggaagcatggaaaatatgtgtggatgaca
tacaaagaagtatatgataaagtgatacaggctgggaatgctatccgtgcttgtggagtt
gagccaggaggaaagtgtggaatttatggtgtcaattgtgcagcatggataatgagcatg
gaggcatgtaatgctcatggattgcactgcataccattatatgatacattaggtgctggt
gcggtggaattcatcataggccatgccgaggtttcaattgcttttgtagaagagaaaaag
atccctgagctgttaaaagcattcccgaatgctggacaatatctgaaaacaattgtgagc
tttggacaagttacccctgaacaaaaagaacaagtcaaaaactttggttcagcaatccac
tcatgggacgagttcttggcattagggaaagacaaaaattttgatctgccagtgaagaag
aaaaccgacatttgtaccatcatgtacactagtggaacgactggtgatcccaagggtgtt
ctgatttctaacaacagcattgtaacacttatagctggtgttcgtcgtctgctagagtct
gctaatgagtcgttaagtgcagatgatgtatatctgtcatttctccctctggcacatatc
tttggtcgggtgattgaagaatgtttcatacatcatgggggttccattggtttctggcga
ggggatgtgaaattactgactgatgacataggggagctgaaacctaccattttctgtgct
gtccctcgggtcttagatagaatttattcaggcttgcaacagaagatcacgtctgggagt
ttctttaaaaataaattgtttaatttagcttattcatataagctgtataacatgaagggt
ggaagtaaacatgaagaggcgtctgtattaagtgacaaacttgttttcggcaaggttaag
cagggcttaggtggaagggtacgcattatactatctggagcagccccacttgctcctcat
gtagaaggttttctgaaagtggtcgcatgctgccacgtcctacaaggatatgggctgact
gagacgtgtgctggatcatttgtgtcactgcctaatgaaatgagcatgttgggtacggtg
ggaccaccagtaccaaatttggacgctcgtttggagtcggttccagaaatgaattatgat
gctctttcaagtacaccacaaggggaaatatgcataagggggggtacattgttttcaggc
tactacaagcgtgaggaccttaccgaagaggtcttaattgatggctggttccatacaggt
gatattggcgagtggcaaccagatggaagcatgaaagttatcgaccgcaagaaaaacatt
tttaagcttgcacagggagaatatgtagcagttgaaaacttggagaatgtctatgcactt
gttcctgctgttgatgaagtatgggtatatgggaatagctttgagtcatgtcttgtcaca
gttgtaaaccccaataagaacgcctttgaaagttgggccaaaacgaatgatgtatctgga
gattttgattccttgtgtcaaaatcctaaggctaaagagtacatactaggagagttaact
agaatcgggaaagagaaaaagttaaaaggctttgagttcattaaagcggttcacctagat
catgtaccatttgacattgaacgtgaccttttgaccccgacgttaaagaaaaagaggccc
cagatgcagaaatattatcagagtataattgatgatatgtacaagagcatgaagcagtga
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