Erigeron canadensis (horseweed): 122584844
Help
Entry
122584844 CDS
T07610
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122584844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecad03032
]
122584844
03400 DNA repair and recombination proteins [BR:
ecad03400
]
122584844
DNA replication proteins [BR:
ecad03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
122584844
DNA repair and recombination proteins [BR:
ecad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
122584844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
RTT107_BRCT_5
TopBP1_BRCT0
ECT2_BRCT0
DUF3933
Motif
Other DBs
NCBI-GeneID:
122584844
NCBI-ProteinID:
XP_043612844
LinkDB
All DBs
Position
1:22250990..22263225
Genome browser
AA seq
942 aa
AA seq
DB search
MRNTTTKTTTFNGANVFMSRKLVPPEIFDSLHDILKHNSASVYLCCDPSRNGPNDYHIIS
SRDHEKFDDLHQKGCNLLGPQCVFFCAKEHRELPKQGFTCCLAMDGVKILASGFELETKI
EIEKLVTAMGGVYQTKVSSDVSFVIVKNVLAAKYKWALNTLKKPIVSESWLHQCWKEHRV
VPHESYRVLPFSGLTISVSQIPLDERKEMEKLVLHNGGKYSAELTKKITHLVCDATESDK
YKAANRWGHIHIVSRAWFHQSVARRACLNEESYPVQRTPATSTNRQKSSIKVQPIKNNAI
TNSHSGPCSMTHQEIPCDRFSDAEMEATLSQNMASTIPDVPSHVNEEYAPPCIQSKSTVN
PESCIAKDSQSDDNDLYLLNCKIHLVGFDASEMRRLVNMVRRGAGSRYMSLNEQLTHIVV
GTPSETEKKEVRSLSAMGVISVVKTVWLEDCEREKKEVPVVRRHVAFDLLLPKDSVSFSK
GSVSAMPSLKQASLSTIQPILPTYRSQSWTEGQQKVQHRVGNKSQDIKSSVFKGRSFRFS
SSFPDVQRGEIVDWIHEGGGEVVEIQEEKSVNYIVESHGVLCGQSQFNGVTNVSSHWIRS
CLQDGHLLDVHSHILFSPLQCKVPLPGFEGLQFCVSQYEEKHKELLRNLCHVLGAKLVNK
LTKKVNYLICQFTEGPKYEAAYQWGIQTVTFEWILDCVKQNKVVASSRFLPKEATVSDRE
AGMCTMSQYPTQAVRMISETGASQLTSQSQDPKMIDGQINDIRVREELKNTATCSKKPRL
SEDGCRKDLLSSGSSRIDPVYGSTFTENSVEVSKSVPDVAAAIEDLLEQTSKIHDQKAPE
RTATDNYVSEIFASDSLRLGNDVQIEDPHSTFGLSKHWTRRSSETADITNYGGQENNGLN
GGFSETQTESQVVSYEEDLSGRQMIIDRVRTRSGLTPSPSLP
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatactactacgaagacgacgacgttcaatggagcgaatgtattcatgtctagg
aagttagttccccccgagattttcgattctcttcacgacatccttaaacataactctgct
tctgtctacttatgttgtgatccctctcgtaacggtcctaacgattatcacattatctcc
tctcgtgatcatgaaaagttcgacgatttgcatcagaaaggttgtaatttgcttggtcct
caatgtgtgtttttctgtgcaaaagagcacagagagctgccaaaacaaggattcacttgt
tgtcttgcgatggatggagtcaaaatactggcttctggctttgaactggagacaaagatt
gagattgagaagttagtgactgctatggggggtgtgtaccaaacgaaagtatcatcggat
gttagctttgtgattgtgaagaatgtactagctgcgaagtacaagtgggcattgaacact
ttgaagaaaccaattgtctcagagagttggctgcaccagtgttggaaagagcatcgtgtt
gttcctcatgagtcatacagagttcttccattttctgggttgactattagtgtctcccaa
attccgttagatgaacgaaaggagatggaaaagcttgttctccataatggaggcaaatac
tctgctgaactgacaaaaaagatcactcatttagtttgtgatgctactgaaagtgacaaa
tataaggctgccaacagatggggccacattcatattgtcagtagagcatggttccatcag
tctgtcgctagaagagcatgcctaaatgaagagtcatatcctgtccaaagaacccctgcc
acatctacgaatagacagaaaagttctataaaggtgcagccaatcaagaataatgctatc
accaactcacactctggtccgtgttctatgacccatcaagagattccctgtgataggttt
tcagatgctgaaatggaagcaactctttcacagaacatggcttctactatcccagatgtt
cctagtcatgtcaacgaggagtatgcaccaccttgcattcagtcaaaaagtactgtgaac
ccggagagttgtattgccaaggactctcaatccgatgacaatgatttatatttgttaaat
tgcaaaattcatcttgttggttttgatgcctctgaaatgcgtagactggtcaacatggtt
cgcagaggggctggatcacgttatatgtctctcaatgaacaattaacacacattgttgtt
gggactccctcggaaactgagaagaaagaagtgagaagtctctccgctatgggtgtcatc
agtgtggtgaaaacagtatggcttgaggattgtgaacgtgaaaagaaagaagttcccgta
gttcggagacatgttgcttttgatttgctcctcccaaaagattctgtatcctttagcaag
ggatctgtaagtgcaatgcctagtctgaaacaagcaagcctgtcaaccattcaaccaatt
ttgccaacttatcggtctcagagttggactgagggtcaacagaaagtacaacatcgcgtc
ggcaacaaaagccaggatattaaatcaagtgtctttaaagggagatcttttcgcttttcc
agttccttccctgatgttcaaagaggtgaaattgtggattggattcatgaagggggcggt
gaggtggtggaaattcaggaggagaaaagtgttaattacattgtcgaatcccatggtgtt
ctatgtggtcaaagccagtttaatggtgttacaaatgtatcctctcactggattaggtca
tgtctacaagatggccacttacttgatgttcacagtcacattctcttttctccacttcaa
tgcaaagttcctttacctggatttgaagggcttcagttttgcgtatctcagtatgaggag
aagcataaagagctactgagaaacttatgccatgttcttggagcaaaattagttaacaag
ttgaccaaaaaggtcaactatttaatatgtcagttcactgaaggtccaaagtatgaggct
gcttatcaatgggggatacaaacagttacatttgaatggattttggattgtgttaagcag
aacaaagttgttgcttctagtcgatttttaccaaaagaagctactgttagtgacagagag
gcagggatgtgcaccatgagccagtatccaactcaagcagttcgaatgatttcagaaact
ggtgcatctcaactaacaagtcaatctcaggaccctaaaatgattgatggccagattaat
gatatccgagtaagagaggagttaaagaatactgccacgtgcagtaaaaagccaaggctt
tctgaagatggctgcaggaaagatctactatcttctggatcaagtcgcatagatcctgtt
tacgggagtacttttactgaaaatagtgtggaagtttctaaatcagtccctgatgttgct
gctgctattgaggacttgttagaacagacaagcaaaattcatgaccagaaggcaccggag
agaactgccactgataactatgtatctgagatattcgcatctgatagtttaaggcttggc
aacgatgttcagatagaggatcctcattctacttttgggttgtctaaacactggacaagg
aggtctagtgaaacggcagacattaccaactatggtggacaggaaaataacggccttaat
ggaggtttcagtgaaacacaaacggaatcccaggttgtgagttatgaagaagatttatct
ggaaggcagatgatcatagacagagttaggacacgaagcggcctcactcccagcccgtcc
ttaccatga
DBGET
integrated database retrieval system
