Erigeron canadensis (horseweed): 122584922
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Entry
122584922 CDS
T07610
Name
(RefSeq) protein transport protein SEC23
KO
K14006
protein transport protein SEC23
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122584922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122584922
Membrane trafficking [BR:
ecad04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
122584922
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Zn_ribbon_10
Vps36-NZF-N
TBC2_N
Motif
Other DBs
NCBI-GeneID:
122584922
NCBI-ProteinID:
XP_043612940
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All DBs
Position
1:complement(3591053..3598000)
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AA seq
794 aa
AA seq
DB search
MDFVELEAIEGLRWSWNSWPISSKPSADLVIPLSIMQTPLMKFNELPLLPYDPLICIHCG
SILNPYARVDYQSRIWVCPFCYHKNSFPRSYADIGENNIPAELFPTYSTVEYQLGGHQGL
VMNPGSNPVHNWANGANGLGKSGALMGSVSSLSSLDRGGSGGRGMGMGGGVGPVFVFVVD
GCSSEEELQVLKNELLLIVAQLPDNAMVGLIVFDSMVKVYDLGFSECLRVVVFHGERTLS
SNQIIDLLGIHPTKHLIGKTQGVQKQSFILPASECEFNITTAIEDICYSSPLTPGHRSPR
CTGAAIQVAIALLEGCSVSNGSRVMVFTSGPATMGPGVVVSQDLNQSIRTHRDINSGHAP
FYDKSCDFYKQISQKLTDLSMVLDLFACSLDQVGITEMREPVEKSGGFIMLAESFESDQF
RKCLRHIFSRDELGILNMCFDVTIEIVTTKDVKICGAIGPCISLGKKNGSVSDKEIGEGG
TNTWKLGTITDKTCIAFFFQVSADQKPQPGSAFFIQFITKYRHGNMGLRKRVTTAARRWV
SGGAPEIAAGFDQETAAAVMARLAVHETKTNFPREVVRWLDKELISFASKFGDYIPEDPA
SFRLSTNFSLYPQFMYHLRRSQFIDVFNSSPDETAFFQIMLNREGVVGSLIMIQPTLSRY
SFDGPPEPALLDVCSLSPDVILLFDSYFYVVVHYGSKIAQWKKLGYDRDPNHESFRKLLE
APEVEAEQLVAQRIPVPKLVKCEQHSSQARFLLAKLNPSATHKSSYVDGSEVIMTDDVSL
QVFIEHLQELAVQG
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggattttgtagaattggaagcaatagaagggttaagatggtcatggaattcatggcca
atttcatcaaaaccatcagcagatctggtaatcccattatcaataatgcaaaccccatta
atgaaatttaatgaacttccattattaccttatgatcctttaatttgtattcattgtggg
tccattttaaacccatatgctcgtgtagattaccaatctagaatctgggtctgccctttt
tgttatcacaagaattcttttccaagatcttatgccgatatcggcgaaaacaatatccct
gctgaacttttccctacttatagtactgttgagtatcagttaggtggtcatcagggtttg
gtcatgaaccccggttcgaacccggttcataattgggctaatggggctaatgggttggga
aagtcgggtgctttaatgggttctgtgtcgtcgttgtcgagtttggatagagggggaagt
ggagggaggggaatgggaatgggggggggggttgggccggttttcgtgtttgtggttgat
ggttgttcgagtgaggaagagttgcaagtgcttaagaatgagttgttgttgattgttgct
cagttgcctgacaatgcgatggtcgggttgatcgtgtttgattcgatggtgaaagtgtat
gatcttgggttttcagagtgtttacgggtggttgtgtttcatggagaacgaacgctttca
tctaaccagatcatagatttactgggaatccatccaactaagcatctaattgggaaaaca
caaggggtgcaaaaacagagctttatattaccagcttccgaatgtgaatttaatattacc
actgccattgaagatatctgctattcatcaccactcacaccaggtcaccggtctcctcga
tgtacaggtgctgcaatacaagttgccatagcgcttttagaaggatgctcagtctctaat
gggtctcgtgtaatggttttcacttctggacctgcaaccatgggaccaggggtggttgtg
agtcaagatctaaatcaatcaattagaactcacagagacataaacagtggtcatgctcct
ttttacgataagtcttgtgatttttacaaacaaatatcgcagaagctaacagatttgtcc
atggttcttgatctgtttgcttgttctctggatcaagttggaataaccgagatgcgtgag
ccagtggagaaatcaggtggcttcataatgctggcagaatctttcgaatcagatcagttt
agaaaatgcttacgtcacattttcagtcgtgacgagttaggtattttgaatatgtgtttt
gatgtgactattgagatagttaccacaaaagatgtgaaaatatgtggcgccattggaccg
tgtatctcacttgggaaaaagaatgggtcagtgagtgataaggagattggtgaaggcggg
accaacacgtggaagcttggaacaataactgataaaacctgcatagccttcttttttcaa
gtgagtgcagaccaaaaaccacagcccgggtccgccttttttatacagttcataacaaag
tatagacatggaaacatgggacttcggaaacgggtaactacagcagctagaaggtgggtt
agtggtggtgcacctgaaatcgctgcaggttttgaccaagaaactgcagctgcagtcatg
gctagacttgcggtccatgaaaccaagacgaatttcccaagggaggtggtgagatggctc
gataaggagctaatcagtttcgcatcaaagtttggtgactatatcccggaagaccccgca
tcatttcgtctttcgaccaatttctcgttatacccgcagttcatgtatcacttaagaagg
tctcagtttattgatgtattcaacagcagcccggatgagactgcgtttttccagataatg
ttaaatcgtgaaggagttgtggggtcattaataatgatacaaccgactctttcccgatat
tcatttgacgggcctcccgaacctgctcttctagatgtttgttcgttatcacccgatgta
attctgctatttgactcctatttttatgttgttgttcattacggttccaagatagctcaa
tggaagaagctgggctatgaccgggatccaaaccatgaaagctttaggaagctattggaa
gcaccagaagttgaggcggagcagctcgtggctcaaaggatccctgttccaaagcttgtg
aagtgtgagcagcatagtagtcaggctaggtttcttttggccaagttgaacccttcggct
actcataagtcgagctatgtggatgggtcagaggttataatgaccgatgatgtgagctta
caagtgtttattgagcatttgcaagaattggcagttcaaggctga
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