KEGG   Erigeron canadensis (horseweed): 122584935
Entry
122584935         CDS       T07610                                 
Name
(RefSeq) ras-related protein RABF1
  KO
K07887  Ras-related protein Rab-5A
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad04144  Endocytosis
ecad04145  Phagosome
ecad04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    122584935
   04145 Phagosome
    122584935
   04148 Efferocytosis
    122584935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ecad04131]
    122584935
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ecad04147]
    122584935
   04031 GTP-binding proteins [BR:ecad04031]
    122584935
Membrane trafficking [BR:ecad04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    122584935
 Endosome - Lysosome transport
    122584935
Exosome [BR:ecad04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122584935
  Exosomal proteins of other body fluids (saliva and urine)
   122584935
  Exosomal proteins of colorectal cancer cells
   122584935
  Exosomal proteins of bladder cancer cells
   122584935
GTP-binding proteins [BR:ecad04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    122584935
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA GTP_EFTU MMR_HSR1 AAA_7 AAA_16 ABC_tran
Other DBs
NCBI-GeneID: 122584935
NCBI-ProteinID: XP_043612953
LinkDB
Position
1:32211535..32215918
AA seq 199 aa
MGCSSSLPDRSAGRIGGLNPNGADSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVGVIVYDITNPDSF
HKAQYWVKELQKHGSPDIVLALVGNKADLQEKREVSVQDGIDYAEKNGMFFIETSAKTAD
NINQLFEEIAKRLPRPAPS
NT seq 600 nt   +upstreamnt  +downstreamnt
atgggttgctcctcctcccttccagatagaagtgcggggcgtataggtggacttaacccg
aacggtgctgattcggatgctaagaatcttcgtgttaagctagtgctattaggggactct
ggtgttgggaaaagctgcattgttcttcgcttcgttcgtggtcagtttgatccgacatcc
aaggtgactgtcggcgcttcatttttgtctcaaacgattgctcttcaagactcaacaacc
gttaaatttgaaatctgggatactgctggccaagagagatatgcagcattagccccactt
tattaccgaggcgccgccgttggagtcattgtatatgatataactaatcccgactcattt
cataaagctcaatactgggttaaggaactacaaaagcacgggagccctgatattgtcttg
gctttagttggtaacaaggccgatcttcaagaaaaacgggaggtgtcagttcaagatgga
atcgactatgcagaaaaaaatgggatgttcttcattgaaacttctgctaaaacagcagat
aacatcaatcagctatttgaggaaattgcaaagagattaccacgacccgctccatcatga

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