Erigeron canadensis (horseweed): 122584935
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Entry
122584935 CDS
T07610
Name
(RefSeq) ras-related protein RABF1
KO
K07887
Ras-related protein Rab-5A
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04144
Endocytosis
ecad04145
Phagosome
ecad04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122584935
04145 Phagosome
122584935
04148 Efferocytosis
122584935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122584935
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecad04147
]
122584935
04031 GTP-binding proteins [BR:
ecad04031
]
122584935
Membrane trafficking [BR:
ecad04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
122584935
Endosome - Lysosome transport
122584935
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122584935
Exosomal proteins of other body fluids (saliva and urine)
122584935
Exosomal proteins of colorectal cancer cells
122584935
Exosomal proteins of bladder cancer cells
122584935
GTP-binding proteins [BR:
ecad04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
122584935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
RsgA_GTPase
Gtr1_RagA
GTP_EFTU
MMR_HSR1
AAA_7
AAA_16
ABC_tran
Motif
Other DBs
NCBI-GeneID:
122584935
NCBI-ProteinID:
XP_043612953
LinkDB
All DBs
Position
1:32211535..32215918
Genome browser
AA seq
199 aa
AA seq
DB search
MGCSSSLPDRSAGRIGGLNPNGADSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVGVIVYDITNPDSF
HKAQYWVKELQKHGSPDIVLALVGNKADLQEKREVSVQDGIDYAEKNGMFFIETSAKTAD
NINQLFEEIAKRLPRPAPS
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgggttgctcctcctcccttccagatagaagtgcggggcgtataggtggacttaacccg
aacggtgctgattcggatgctaagaatcttcgtgttaagctagtgctattaggggactct
ggtgttgggaaaagctgcattgttcttcgcttcgttcgtggtcagtttgatccgacatcc
aaggtgactgtcggcgcttcatttttgtctcaaacgattgctcttcaagactcaacaacc
gttaaatttgaaatctgggatactgctggccaagagagatatgcagcattagccccactt
tattaccgaggcgccgccgttggagtcattgtatatgatataactaatcccgactcattt
cataaagctcaatactgggttaaggaactacaaaagcacgggagccctgatattgtcttg
gctttagttggtaacaaggccgatcttcaagaaaaacgggaggtgtcagttcaagatgga
atcgactatgcagaaaaaaatgggatgttcttcattgaaacttctgctaaaacagcagat
aacatcaatcagctatttgaggaaattgcaaagagattaccacgacccgctccatcatga
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integrated database retrieval system