KEGG   Erigeron canadensis (horseweed): 122584943
Entry
122584943         CDS       T07610                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122584943
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ecad03041]
    122584943
Spliceosome [BR:ecad03041]
 Complex A
  U2 snRNP components
   U2 related factors
    122584943
 Complex B
    122584943
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 122584943
NCBI-ProteinID: XP_043612968
LinkDB
Position
1:complement(56876888..56881120)
AA seq 309 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSVSPTLLLSNMYQRPDMITP
GVDAQGNPIDPRKIQDHFEDFYEDLFVELNKYGEIESLNVCDNLADHMVGNVYVQFREEE
YASKALKNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKIGREL
RRELFGRYRRHSRSRSRSRSPYRHKSYDERGHGSRGHSRRYDDRDRDRDYYYDSRSRRHR
STSPLHRRDRSRSSEGKRHHSPVREGSEERRAKIEQWNRQREERRADDSANRNNYMKNGD
GSYDQQSEY
NT seq 930 nt   +upstreamnt  +downstreamnt
atggcggaacatctggcatcgatatttggaacggagaaagacagagtaaactgtccattt
tatttcaagatcggcgcgtgtaggcacggcgatcggtgttcgaggttacacacaaagcca
agtgtaagccctacattattgttatctaatatgtatcagcgcccggatatgattactcct
ggtgttgatgctcaaggcaatcctatcgatcctagaaaaatccaagatcactttgaggat
ttttatgaagatctctttgtggagctgaacaaatatggggaaattgaaagtttgaatgtc
tgtgacaatcttgccgatcacatggtgggaaatgtttatgttcagtttagggaggaagaa
tatgcttcaaaagcactgaagaaccttacagggagattctatgctggtcgacccatcatc
gttgacttttcaccagtgactgatttccgggaagctacttgcaggcaatatgaggagaac
acttgcaatcgtggtggttattgcaactttatgcatctaaaaaagattggcagggaattg
aggcgggagctgttcggtaggtacagaaggcatagccgtagccggagcaggagcagaagt
ccatatagacataaaagctatgatgagcggggccatggaagccgtggccatagccgaagg
tatgatgatagggaccgggatagggattactactatgatagtcggtccaggagacacagg
agcacaagcccactgcataggagagatcgcagcagaagttcggaaggtaaaagacaccat
agtcctgttagggaaggtagtgaagaaaggcgtgccaaaattgagcaatggaacaggcaa
agggaagaaaggcgtgcggatgatagtgcaaacagaaacaattatatgaagaatggtgat
ggatcctacgatcagcaatctgagtactaa

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