Erigeron canadensis (horseweed): 122585000
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Entry
122585000 CDS
T07610
Name
(RefSeq) AP3-complex subunit beta-A
KO
K12397
AP-3 complex subunit beta
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
122585000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122585000
Membrane trafficking [BR:
ecad04131
]
Endosome - Lysosome transport
Others
AP-3 complex
122585000
Endosome - Golgi transport
122585000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
AP3B1_C_2
HEAT
AP3B1_C
HEAT_2
INTS1_R4
Svf1_C
Motif
Other DBs
NCBI-GeneID:
122585000
NCBI-ProteinID:
XP_043613029
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All DBs
Position
1:29581325..29589479
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AA seq
1135 aa
AA seq
DB search
MFTQFGTTAENFSKASTMVFRIGTDAHLYDDPDDVSISPLLDSKYDSEKCEALKRLLALI
AQGLDVSNYFPQVVKNVASQSLEVKKLVYLYLLHYAERRPNEALLSINIFQRDLGDQNPL
VRAWALRTMAGIRLHVISPLVLVAVRKCSRDPSVYVRKCAANALPKLHDLRLEENATAII
EIIGILLNDNSPGVVGAAAAAFASVCPNNLPLIGRSYKRLCEILPDVEEWGQIILIGILL
RYVIARHGLAKESIMASLCPEDLNDVKSGSDSDTNYLGIKKTYEANSVIQNPELVAMVSR
SYLSGLDKYLPHSTTADVIPPEFDSSRFTSSKSDDDVKILLQCTSPLLWSRNSAVVLAAA
GVHWIMAPREDIPKIVKPLLFLLRSSTASKYVVLCNIQVFAKVMPSLFAPSFEDFFVSSS
DAYQVKALKLEILSSIATDASISVIFQEFQDYVRDPDRRFAADTVAAIGLCAKQNSQVAT
TCLEGLLALTSPKSVNCTSGSMEDDAAVLIQAITSIKDIIKQDPFRHDKAIIFLARNLDS
IKVPVARALIVWLVGEYNSVGDIIPKMVPVILRYLARRFPSESVETKHQILNAVVKVLLG
SKGEDFKTAKTILSYVLELAKFDLNYDVRDRARVLRKLLSCYYNPSELEEETSQKPENNE
LALLVAEHIFGDTITSSTEMVNNRFYLPGSLSQIVLHAAPGYEPLPEPCSLTELDMIKEM
NISGEGTAEVESYEVDHSGSDSGSMNEEGSYDSEDSVTSSSGTDNTNESAENDDNDNTES
LINFSDVGKSEKDVEVSKENNLHSDFSELMSKGALESWLDENPSSSQNVPGLDNERISSA
RISIGDISGRVNPRTYTLLDPAYGNGLRVVYTFSSESSTISPSLVSVNTFFENCSSEPMS
KVFLSGEESDTSSESLDQSLPTDGSSLQSQKDVLAPVEEIDVLKPGETTKQIIHVRFNHH
LLPLKLILRCNGKKHPVKLRPDIGYFIKPLPMDLDVFSHKESELPGMFEYTRRCSFTDHL
AEVINDKDHDGSLVKDSFIVICQTLASKMLSNANLHLVSVSMPVDANLNDASGLCLRFSG
EILSNSIPCLVSVTLDGNCFEPLNASVKINCEETVFGLNLLNRIMNFLAEPPLTS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgttcacacagttcggcaccaccgctgagaacttcagcaaggcatcaacaatggtgttc
cggatcggaacagacgctcatctttacgacgatccagatgacgtcagcatctcgccgctt
ttagacagcaaatacgattccgaaaaatgtgaagctcttaaacgattactcgccttaatc
gcacagggtttagatgtatctaattatttccctcaggttgttaagaatgttgcatctcag
tcgttggaggttaagaagctagtttacttatatctgctgcattatgctgaaaggcgtccg
aatgaagcattgttgtcaattaatattttccagagagatttgggggaccagaacccatta
gtgagggcctgggcactgcgtactatggctggtattcgtctgcatgtgatctcgcctctt
gttttggtggcagtaaggaaatgttcccgtgatccatctgtatatgtgcgaaaatgtgct
gctaatgctctcccaaagcttcatgatttgcgtcttgaagaaaatgctacagcaattatc
gagattattggaatactattgaatgacaattcccctggagtagttggagctgctgcagca
gcatttgcttctgtgtgcccaaataatttaccccttattggtagaagctacaaaagactg
tgtgagattcttcctgatgtagaggagtggggtcagatcattttaataggaattctgctc
cgttatgtgattgcaagacatgggcttgcaaaagaatctattatggcatcattatgtccc
gaagacttaaatgatgtaaaaagtggttcagactcggataccaactatttaggaatcaag
aaaacatatgaagccaacagtgttattcagaatcctgagctagtagctatggtctcccga
agttacctttcaggactagataagtacttgccacattcgactactgcagatgtgatacca
ccggaatttgattcatcgagattcacatcatccaaaagtgacgatgatgtgaagatcctg
ctacagtgcacttcacctttattatggagtcggaacagtgcagtggtgcttgctgctgct
ggggtacattggattatggctccacgggaagacattccaaaaattgtcaagcctcttttg
tttctcttgagatcatccactgcctcaaaatatgtggtcctatgcaacattcaagtcttt
gctaaagtgatgccttctcttttcgctccaagttttgaagacttctttgtaagctcttct
gatgcataccaagttaaagcactgaagcttgagatcctttcttccatcgccacagatgca
tcaatctcagttatatttcaagagttccaggattatgtcagagatccagacaggagattt
gctgctgatactgttgctgctattggtctgtgtgctaagcagaattcacaagtagcaacc
acctgcttggagggactactggctctaacatcacccaaatctgtaaattgtacctctgga
tccatggaagatgatgcagctgttttgattcaagcaattacatccatcaaagatattata
aaacaagatccttttaggcatgataaggccattatatttttggcccggaatttggattca
atcaaggttcctgttgcccgtgcattgattgtttggctagtgggtgaatacaattctgtt
ggcgatatcattccaaagatggtacccgtgattctaagatatctggctcgacgctttcct
tctgagtcggttgagacaaaacatcagattctaaatgctgttgttaaggtccttttaggt
tcaaaaggggaagatttcaaaactgcaaaaaccatactaagctatgttctggagcttgcc
aaatttgatctaaattatgatgtgcgagatcgggcacgtgtgttaagaaagcttctatca
tgctactataatccgagtgaactagaggaagaaactagtcagaaacctgaaaataatgaa
ctagcacttttagttgctgaacatatatttggggatacaataacatcatcaaccgaaatg
gttaataatcgtttctaccttccagggtctctctcacagatagttctccatgcagcccca
gggtatgaacctcttcccgagccttgtagcctaaccgaattggatatgatcaaagaaatg
aatatatcaggtgaaggcaccgctgaggttgaatcgtatgaagttgatcattctggctcc
gactcagggtctatgaatgaagaaggcagttatgattcagaagactctgtcactagctca
tcaggaactgataataccaatgagagtgctgaaaatgacgataatgataacactgaatca
ctaattaacttttccgatgttggcaaatcagaaaaagatgttgaagtttcgaaggagaac
aatcttcatagtgattttagtgaattgatgtcgaaaggagctttagaatcatggttggat
gaaaatccaagttcaagtcagaatgtacctggattagataatgaaaggatatcatcagca
aggatttcaattggagatattagtgggagagtcaacccgagaacatatacacttctagat
ccagcatatggaaatgggttgagagtagtgtatacattttcatctgaatcatcaaccata
tcaccatcactcgtaagtgtcaacactttttttgaaaactgctctagcgagccaatgtct
aaagtatttctgagtggtgaagaatctgacacgagttctgaatctttggaccagtcattg
cctactgatggaagttctttgcaatctcaaaaggatgttctggctcctgtagaggaaatt
gatgtgcttaaacctggtgagactacaaaacaaatcatccatgttcggtttaatcatcat
ctcttacctctgaagctcatcttacggtgcaatggcaaaaaacacccggttaaattacgt
cctgacataggatatttcataaagcctctcccaatggatcttgatgttttctcccacaaa
gaatctgaacttcctggaatgtttgaatacacaagaagatgttccttcacagatcacctt
gcagaggtgatcaatgacaaggatcatgatgggtcattggtaaaggattcgtttattgtt
atatgtcaaactttagcatcaaagatgctcagcaatgcaaatcttcatcttgtatctgta
agcatgcccgtggatgcaaacctcaatgatgcatcaggactatgcttaaggttcagtggt
gagatcctaagcaactcgattccttgccttgtatctgttacacttgatggtaactgcttt
gaaccacttaatgcatctgtaaaaatcaactgtgaagaaactgtgtttggtctgaatctg
ttgaacagaattatgaactttttagccgagcctcctctcactagttag
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