Erigeron canadensis (horseweed): 122585121
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Entry
122585121 CDS
T07610
Name
(RefSeq) nuclear transcription factor Y subunit A-10-like isoform X1
KO
K08064
nuclear transcription factor Y, alpha
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecad03000
]
122585121
Transcription factors [BR:
ecad03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
122585121
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Gene cluster
GFIT
Motif
Pfam:
CBFB_NFYA
Motif
Other DBs
NCBI-GeneID:
122585121
NCBI-ProteinID:
XP_043613154
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Position
1:complement(55444532..55447606)
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AA seq
330 aa
AA seq
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MKTCSNNLRMNSVYYKEHDDGIASHQVGSLSSGPGPWWSGLVTQPTFEDSVGRVKSSSME
NCGEQLMPIAPKPSPRATDQKGNMTTHFNVFSGESKNSSNAQKSLQFQAAFTIQSSPQEY
GGHLELGFSQPAVICGNYPLGDQYYGMLSAYGPQIAGRVMLPLNLSSDDGPVFVNAKQYH
GIIRRRRSRAKAEMARKVTKSRKPYLHLSRHLHAKRRPRGCGGRFLNTKEMENVKVGNLD
SKLTEHPTGSQRSEVVQSDQETNGSRIHMPVSEVTSTFSMGDLNHFPIGNLSGVSISDMM
MSGNAIHGFGMHNKWVAAAGGGDNRCNLAV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacttgcagcaacaatttgagaatgaattctgtgtattacaaagaacatgatgat
ggaattgcgtcacatcaggtgggttcactgtcatctgggcctggaccgtggtggagtgga
cttgtgactcaacccacttttgaagattccgtcggccgagttaagtcttcatcaatggaa
aactgtggagaacaactcatgcctattgcccctaaaccgtcgcctcgtgccactgatcag
aaagggaatatgacgactcatttcaatgtcttttctggtgagtctaagaattcatcaaat
gcgcaaaagtcattgcaatttcaggctgcttttactatacaatcttctccacaagagtat
gggggtcatcttgagctaggatttagtcagccggctgtgatatgtggcaattatcctttg
ggcgatcagtattatggcatgctctctgcttatggacctcaaatcgcgggccgggttatg
ctgcctttgaacttgagttctgatgacggacctgtatttgtgaacgcaaagcagtatcat
ggaataattaggcgcaggcgatcgcgtgctaaggcagaaatggcgagaaaggttacaaaa
agccgtaagccatatctgcacctgtcgcgccatctccacgccaaacgcaggccaagaggc
tgtggggggcggtttttaaacacaaaagaaatggaaaatgttaaagttggaaacctggat
tcgaagctgactgaacatccaacaggctctcagagatctgaggtagtgcagtcagatcag
gaaacaaatggtagcaggatccacatgccggtatcagaggtgacaagcacgttttcaatg
ggagacctcaatcacttccctattgggaatctgtcaggtgtttctatttctgacatgatg
atgtctggtaatgccattcatgggtttggcatgcacaacaaatgggttgcagcggctggt
ggcggtgataaccgttgtaacctggcagtttga
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