Erigeron canadensis (horseweed): 122585130
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Entry
122585130 CDS
T07610
Name
(RefSeq) glycine--tRNA ligase, mitochondrial 1-like
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122585130
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ecad01007
]
122585130
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecad03016
]
122585130
03029 Mitochondrial biogenesis [BR:
ecad03029
]
122585130
Enzymes [BR:
ecad01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
122585130
Amino acid related enzymes [BR:
ecad01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
122585130
Transfer RNA biogenesis [BR:
ecad03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122585130
Mitochondrial biogenesis [BR:
ecad03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
122585130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
Motif
Other DBs
NCBI-GeneID:
122585130
NCBI-ProteinID:
XP_043613169
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All DBs
Position
1:complement(9335434..9341086)
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AA seq
662 aa
AA seq
DB search
MGKTVKSSNNGDGLRQAVNNALERHLFNIPSFKIYGGAAGLYDYGPPGATLLDNVLSLWR
QHFVLEENMLQVKCPSVTPEIVLKASGHVDKFTDLKVEDMKTGKSYRADHLLKDYCEDTL
KKDRSIISDEKAAELNKICAVLDDLSADQLGAMIKKYEIMAPETKNSLSDPVEFNLMFKT
SIGPSSETIGYMRPETAQGIFVNFNYLYYYKRNKLPFAAFQIGQAFRNEISPRQGLLRVR
EFTLAEIEHFVDPDNKDHPKYATVTNLEILMFSRDEQESQQSAKRLCLGEAVSKGIVNNQ
TLAYFIGRVYLFLTRLGIDEERLRFRQHLSNEMAHYAEDCWDAEIKCSYGWIECVGIADR
STYDLRVHSDKSGIALVAREKFAEPKEVEKLTITPVKKELGLAFKGNQKMVLEALETMNE
HEAMAMKAALESKGEVEFQVSTLQKTVTIKKNMVSITKEIKKEHHRVFTPSVIEPSFGIG
RIIYCLFEHCFYTRPSKDGYELLNVFRFPPLVAPIKCSVFPLVQNQKYEEVAEQISTSLT
AAGIFNEKDTTGTSIGKKYARADELGVPFAITVDSTSSVTIRERDSKDQIRLNVEEVVAV
VTDVSQGQSTWADILKKYPESFRPWRRLKTQIYGRPTLSLAVLTGLLVIEHCYLLQKLKT
RN
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagacagtgaagagtagtaacaatggtgatggcctccgtcaggcggtcaacaat
gccttggaaaggcacttgttcaatatcccgtcgttcaagatttatggtggtgccgccggc
ttgtatgattatggccctcctggtgccaccctccttgataatgtcctctccttatggcgc
caacatttcgtgttggaggagaatatgctacaagtaaaatgtcctagtgtgactccagaa
attgtcttgaaagcttctggtcatgtagataaatttacagatctcaaggtcgaagatatg
aagaccggaaaaagttatagagctgatcacctgcttaaagattattgtgaggatacgctc
aagaaggatcggtccataattagtgatgagaaggctgctgaattgaataaaatttgtgca
gtactagatgatctttctgctgatcaacttggtgccatgattaagaagtatgagataatg
gcaccggaaaccaagaactcactttcagatcctgttgagtttaatcttatgtttaagact
tctattggtccttcaagtgagaccattgggtacatgcgtcctgaaacagcacaaggcata
ttcgtgaacttcaattatttatactattacaagcgaaacaagcttccatttgctgctttt
caaattggccaggctttcagaaatgagatatctcctaggcagggtcttttaagagttcgt
gaattcacgctagcagagatcgaacacttcgtggaccctgataacaaagaccatccaaag
tatgccacggttaccaacctagagattctgatgttctctagagacgaacaagaatcacag
cagtctgcaaaaagactttgtcttggtgaagctgtttccaaggggattgtcaataatcaa
acacttgcttatttcatcggcagagtatatttgtttttgacaaggctgggtatagatgaa
gaacggttgcggttcaggcagcatctttcaaatgagatggctcattatgccgaagattgt
tgggatgccgaaatcaagtgttcttatggttggattgagtgtgttgggattgctgatagg
tctacatatgacctgcgtgtacactcggataaaagtggcattgctcttgtagctcgagag
aaatttgcagaacctaaagaagtggagaaattaactataactcccgttaagaaggaactc
gggcttgcattcaagggtaaccaaaagatggtgcttgaagcactggaaacgatgaatgag
catgaggccatggcaatgaaggctgcattagaatccaaaggggaggttgaatttcaagtt
tccactctccaaaagactgttactataaagaaaaacatggtttcaataacaaaggaaatc
aagaaagagcaccatagagtttttacaccttctgtaattgaaccttcctttggcattggt
cggattatctattgtctctttgaacattgcttctacacgagaccaagcaaagatggctat
gaactattaaatgttttccggttcccccctcttgtggcaccgatcaaatgtagtgtcttc
ccattggtccagaatcagaaatacgaggaagttgctgaacagatttccacttctctgact
gcagccggaatttttaacgagaaagataccacgggtacatcaatagggaaaaaatatgca
agagcagatgaacttggtgtgccatttgctattactgtagattcgacttcgtcagtgaca
attcgtgagagggatagtaaagatcaaatccgtttgaatgtggaggaggtagtagcagtg
gtgacggacgtatcccaggggcagagcacatgggctgatatcttaaagaaatacccagaa
agtttcaggccctggagacgactaaagactcagatttatggaagacccactttatcttta
gctgtcttaaccggtttactggttattgaacattgttatcttctacaaaaactcaaaact
agaaattag
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