Erigeron canadensis (horseweed): 122585288
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Entry
122585288 CDS
T07610
Name
(RefSeq) probable DNA helicase MCM8
KO
K10737
DNA helicase MCM8 [EC:
5.6.2.4
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecad03032
]
122585288
03400 DNA repair and recombination proteins [BR:
ecad03400
]
122585288
Enzymes [BR:
ecad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
122585288
DNA replication proteins [BR:
ecad03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
122585288
DNA repair and recombination proteins [BR:
ecad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
122585288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
WHD_MCM8
MCM_OB
MCM_lid
Mg_chelatase
AAA_5
AAA_3
Sigma54_activat
AAA_16
MCM_N
FtsK_SpoIIIE
AAA
AAA_29
Motif
Other DBs
NCBI-GeneID:
122585288
NCBI-ProteinID:
XP_043613345
LinkDB
All DBs
Position
1:54779154..54786183
Genome browser
AA seq
795 aa
AA seq
DB search
MTMMITKAGKEMSTNKGGQISHILAKYFPQIDYSHADGKKKLQLTSKLYEHFFSTPDGSD
FISQVKRDEMLFILPLDFQQFRKVCVIMEFYDALERNPKEAILCMCAAVHKVLYSKSNDE
ELDDSAKVNIRLHNYPESMIALKNLKAAYIERLVSVRGTVVKVSTVRPLVVHMSFECTKC
GTTNSRDFPDGKFSPPPSCAVHGCKSRTFNPIRSSAQPIDFQKIRIQELLKSEHHEEGRV
PRTVECELVEDLVDLCIPGDVVTVTGIIRVINNYMDIGGGKSKGKNQGLYYLYLEGISIK
NSKSQSEPESTKDTKSVVKSTDLLDLYSFSQRDSEFVLKYHSEHGRDVFRQILQSLCPSI
YGHELVKAGITLALFGGVRKHSMDQNKVPVRGDIHVIIVGDPGLGKSQLLQAAASVSPRG
IYVCGNATTNAGLTVAVMKDSMTGDYAFEAGAMVLADRGLCCIDEFDKMSAEHQSLLEAM
EQQCVSVAKAGLVASLSAQTTVLAAANPVGGHYDRAKTVNENLKINSALLSRFDLVFILL
DKPDELLDKRVSEHIMSLHAGNVDNSQAARKLANSQSVSGIDLNVKSGSLVSRLRLDPRK
DRDFVPLPSPLLRKYIAYARTFASPRMSRPAAKILQDFYLKLRDRNTSADGTPITARQLE
SLVRLAQARARVELREEISVEDAEDVVEIMKESLYDKYVDEHGCVDFGRAGGMSRPKEAK
RFLGALNKQSELEQKDCFSISEIYSLADRIGLKVPDVDTFVDNLNSVGYLLKKGPKTYQV
LSSTYTRSQSSRSKC
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgatgattacaaaagccgggaaggaaatgtcgacaaataaaggaggccaaatc
tcacacattttggctaaatatttcccccaaatcgattactcgcacgccgatggaaaaaag
aaattgcaactcacttccaagctttacgaacactttttttccactcccgatggatcagat
ttcatctctcaggtaaaaagagatgaaatgctgttcattttgccgcttgattttcaacaa
ttccggaaagtatgcgtgatcatggaattttatgatgcattagaaagaaatccaaaagaa
gctatattatgcatgtgtgctgcagtacataaggttttgtactctaagtcaaatgatgaa
gaattagatgacagtgctaaggttaatatccgtctgcataactaccccgaatctatgatt
gctttgaagaatttaaaggctgcatacattgaaaggcttgtttctgtgcgtggcactgtt
gtaaaagtcagcactgtcaggcctttggtggtacatatgagttttgagtgtaccaaatgt
ggaacaactaatagtcgtgactttcccgatgggaagttttcacctcctcccagctgtgca
gtacatggatgcaaaagcagaacttttaacccaattagatccagtgcacaaccaatagat
tttcagaaaataagaattcaggagttgctgaaatctgagcatcatgaagaaggtcgggtg
ccaagaactgtggaatgtgagcttgttgaagatcttgtagacctgtgcattcctggagat
gtggtgactgttaccggtatcataagggtgataaacaattacatggatataggcggagga
aaatcgaagggaaagaaccaaggattatattacttgtatctggaaggaatttcaattaag
aactccaagtcacagtctgagcctgagagcacgaaagatacaaaatctgtggttaaatct
acagatttgctggatttatattcattcagtcaacgggattcagaattcgttttgaagtac
cattcagagcatggtcgagatgtcttccgccaaatactgcaatcactttgtccttccatc
tatgggcatgaacttgttaaagctgggatcacattggcattgtttggaggtgtgagaaag
cactcaatggatcagaacaaggttcctgtccgaggagacattcatgtgataatcgttggc
gatccaggattgggaaaaagtcaattattgcaggcagcagcttcagtttcaccacgaggt
atatatgtttgtgggaatgccacaaccaatgccggactcactgttgcggtaatgaaggat
tcaatgactggtgactatgcttttgaagctggtgctatggtacttgcagacagaggatta
tgctgtattgatgaattcgataaaatgtctgcagagcaccagtctctactggaagctatg
gagcaacagtgtgtttcagttgccaaggcaggactggtagcaagtttatcggctcaaaca
actgttttagcagcagcaaaccctgttggcggccattacgaccgggcaaaaactgtgaat
gagaacttaaaaataaattctgctttgttatcacgatttgatttggttttcatattgctt
gataagcctgatgagttacttgacaaaagagtttcagaacacattatgtctctccatgct
ggcaatgttgataattcacaagctgcgagaaaacttgcaaattctcaaagtgttagcggt
atagatctgaatgtaaagagtgggtcattagtctcacggttgagacttgatcccaggaag
gaccgtgattttgttccactacctagtcctctactccgtaaatacattgcgtatgcaaga
acttttgcctcgccaaggatgtctagaccagcagctaagatcctgcaggatttctatttg
aaactcagagaccgcaatacttctgctgatggcacaccaataactgcaagacaattagaa
agtctggtaaggctggcacaagctcgggctagggttgagttgagagaagaaataagtgtt
gaagatgctgaggatgttgttgaaataatgaaggaatccttgtatgacaagtatgttgat
gagcatggatgtgtggattttggtcgagctggcgggatgagtcgtccgaaagaagccaag
cgattcttaggtgcacttaacaagcaatcagagctggaacagaaagattgcttttctata
tcggaaatatacagtttggcagataggattgggttaaaagtccctgatgttgacacattt
gtggataatttaaacagcgttggctatctacttaaaaagggcccgaaaacttatcaggtg
ttatcctcaacttataccaggagtcaatcatcgagatcaaagtgttga
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