Erigeron canadensis (horseweed): 122585369
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Entry
122585369 CDS
T07610
Name
(RefSeq) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecad03400
]
122585369
Enzymes [BR:
ecad01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
122585369
DNA repair and recombination proteins [BR:
ecad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
122585369
Prokaryotic type
122585369
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
122585369
NCBI-ProteinID:
XP_043613437
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All DBs
Position
1:complement(49232296..49235374)
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AA seq
503 aa
AA seq
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MTTAAADTSVQLGRIRVLKEAIITNQLPKPGPVVYWMFRDQRLRDNWALIHAVDQANKRN
VPVAVAFNLFDRFLGAKARQLGFMLRGLQQLHLDFQQTLHIPFFLFQGEAIDTIPSFLEE
CGASLLVTDFSPLRQVRGWKEEIVKRVSDSVSIHEVDAHNVVPTWVASDKLEYGARTIRR
KINNWLPAYLIEFPKLMPQSRKWGNPNQIIDWETLIENVLREGAEVPEIEWCKSGENAAL
ETLMGTKGFLTIGLKNYSTDRNNPLKPKGLSGLSPYLHFGQISAQRCAIEAHKLRKVNPQ
AVGTFLEELIVRRELSDNFCYYQPHYDSLQGAWDWAQKTLMDHALDAREHLYTREQLEKA
QTADLLWNASQLEMVHNGKMHGFMRMYWAKKILEWTTSPQEALEIAVYLNDKYHLDGRDP
NGYVGCMWSICGIHDQGWRERPVFGKIRYMNYAGCKRKFDVDGYIAYVKRLVGDIKKRKG
ETLLNSKAKQLTSIQQLPVKKLT
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccgccgccgctgacacttccgtgcaattaggccgaatccgggttcttaaagaa
gcaataataacaaaccaacttcctaaacccggcccagtcgtatactggatgtttagagat
caacggttgagagacaactgggcattgattcatgccgttgatcaagccaacaaacgtaat
gttccagtcgcggttgcgtttaatttgttcgatcggttcttaggcgcaaaagctcgtcag
ttggggtttatgttaagagggttacagcaacttcatctcgatttccaacaaactcttcat
attccctttttcttgtttcagggggaagctattgatacaattcctagttttttagaagaa
tgtggagcttcgctattggttacggatttttcaccattaaggcaagttaggggatggaaa
gaagagatagttaaaagggtgtctgattctgtatcgattcatgaagttgatgcacacaac
gtagtacccacatgggtggcatcagataagttggaatacggagctagaaccattagacgt
aagatcaataactggcttcctgcttatttgattgaatttccgaagttaatgcctcagagc
cgaaaatggggtaacccaaatcagattattgattgggaaacgcttattgaaaatgtatta
agggaaggagctgaagttcctgaaatcgaatggtgtaaatcaggagaaaatgctgcattg
gaaacattgatggggactaagggtttcttaacaattggattaaagaattactccacagat
cgtaataaccccttaaaacccaaagggctttctggtctttctccatatctgcactttggg
cagatatcggcccaacgctgtgcaattgaggcccataaattacgcaaagttaatccacag
gcggttggtacatttctggaggaactgatcgtgcgcagggaactgtctgataacttctgc
tattatcagcctcattatgattcgttacagggtgcatgggactgggcgcaaaaaacactt
atggaccatgccttagacgcacgtgaacatctatacacgagggagcagctggagaaggca
caaactgcagatcttctatggaatgcttcacagttagagatggttcataatggaaagatg
catggtttcatgcgaatgtactgggccaaaaaaatcctcgaatggacgactagcccccaa
gaagctttagaaatagcagtctatttaaatgacaagtatcatttagacgggagagatcca
aatggatacgttggttgtatgtggtcaatttgtggtatacacgaccagggttggcgagag
agaccagtctttggaaagataagatacatgaactatgctggatgcaagaggaaatttgat
gttgatggatacattgcgtatgtgaagaggttagtgggtgatatcaagaaacggaaaggg
gaaaccttgcttaatagcaaggcaaaacaactcacgagtattcaacagttgcctgtgaag
aaacttacttga
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