Erigeron canadensis (horseweed): 122585376
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Entry
122585376 CDS
T07610
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122585376
04121 Ubiquitin system [BR:
ecad04121
]
122585376
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122585376
Membrane trafficking [BR:
ecad04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
122585376
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122585376
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
Zf_IFT144_1st
zf-RING_16
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
122585376
NCBI-ProteinID:
XP_043613446
LinkDB
All DBs
Position
1:21101601..21108806
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AA seq
330 aa
AA seq
DB search
MSQVIYPPTTTTTAGPPPKLYFCYQCNHTVSITPSPQLFCPDCNGGFLEEFEPPNPNPNP
FLAFEDPDLSALFGGSESFQNPNSGEFNPFAFLQNYLATLRAGGADIQFVIENANNDNEN
DNDGDSDNDSGSGFRVRSNLGDYFVGPGLEQLIQQLAENDPNRYGTPPASKEVVSGLPNV
EISKELLESDCADCAVCKESFELSEVAKQLPCKHVYHNECILPWLELHNSCPVCRFELPT
DDVEYENRDREVGGGGRRNVVGSGSSDESRGNSDSPGSMERSFGINFPWLFSGFGASAET
SNSGAGDNGDNNSVNSNSGSGGQGRQDGLG
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagtaatctatccccccaccaccacaaccaccgccggaccaccgccaaaactc
tacttctgttaccagtgcaaccacaccgtctcaatcacaccgtcaccccaactcttttgc
cccgattgcaatggcggtttccttgaagaattcgaaccaccaaaccctaaccctaacccc
tttctcgccttcgaagatcccgatttatccgctttattcggaggatcagaatcattccaa
aaccctaattctggtgagtttaatccttttgcatttcttcaaaactatttagctacttta
cgtgctggcggtgccgatattcagtttgttattgaaaatgctaataatgataatgaaaat
gataatgatggtgatagtgataatgatagtgggtccgggtttcgagttcggtcgaattta
ggggattattttgttggaccagggttagaacaattgattcaacagttagcggaaaatgat
ccgaataggtacgggacaccgcctgcttcgaaagaagtggtttccggtttacctaatgtt
gagattagtaaggagttgttggaatccgattgtgctgattgtgctgtttgtaaagagagt
tttgagttaagtgaagtagcgaaacagttgccgtgtaaacatgtttatcataatgagtgt
attttgccgtggttggagttgcataattcttgtcccgtttgtcggtttgagttgcctact
gatgatgtggaatacgagaatagggatcgggaagttggtggtggtgggaggaggaatgtg
gtggggtctggtagtagtgatgagtctcgggggaattctgatagcccgggtagtatggag
aggagctttggtataaattttccttggctttttagtgggtttggtgcgtcagctgagacg
agcaatagtggagcaggggataatggtgacaataactcagtgaattcaaactcgggaagt
ggtggtcaaggtagacaagatggtcttggctaa
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integrated database retrieval system
