Erigeron canadensis (horseweed): 122585482
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Entry
122585482 CDS
T07610
Name
(RefSeq) protein CNGC15b-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
122585482
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecad04040
]
122585482
Ion channels [BR:
ecad04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122585482
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
UBM
IQ
Motif
Other DBs
NCBI-GeneID:
122585482
NCBI-ProteinID:
XP_043613544
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Position
1:54407817..54410367
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AA seq
666 aa
AA seq
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MTNSKRYVRFDADVDVETAEPDPSSLKKDDPKIARKLSRAFSEDYAKTDKTILDPRGEAT
HKWNQLFLIAALFSLAVDPLFFYLPVIKEDMCLDEDVTLKITLTIIRTMVDLMYAIKIYV
RFRTAYVAPSSRLLGRGELVLDSSSISERYLKGEFWLDFLATLPVPQVMTWFHIVDTTEM
MSTKTSVLYFIMIQFFLRLYLTFRLGTHISKQAGLVANVAWVGAAYNLLLFMLAAHVIGA
MWYLLGIERQGLCWVEVCDAETECKHRYFDCVNVNLPLREAWYPTSNVTRICADTNEYKY
GLVEDSVGYSIASATFFKKYSYCLWWGLRGLSSAGQELQASPFLAESHFCILIAITGLIL
FALLIGNMQQYLESRTKRLEEYRVKRMDTEQWMHHRHLPNELRERVRRHDLYKWITTRGV
DEEEILQALPLDIRREIKRYVCAELVRRVPLFDQMDERTVDAICERLKPMICTPGTCLVR
EGDPTNEMLFIMRGHLDSYTTGGGRSGFLNQCEIGPGDFCGEELLTWALDPRPSVIIPSS
TRTVTAITEVEAFALTSEDLKFVATQFRKLHSKKLRHTFRVHSHQWRTWAACFIQAAWKR
YKRRKLAGLLRAKESLSRRTRSGRKVTGLSTLETGVRRGRGYDDDDVIRSPVPKPKDPEF
LDDSHH
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgaccaattctaaaagatatgtcagatttgatgctgatgttgatgttgaaacggctgag
ccagatccttcatctttgaagaaagatgacccaaaaatcgcgagaaagctttcacgagct
ttttcagaagattatgcaaaaaccgacaagacgatacttgatccacgaggcgaagctact
cataaatggaaccaactgtttctaatagcggctcttttctcacttgctgtggaccctctt
ttcttctacctgccggtgatcaaggaggacatgtgtttggatgaagatgtcacacttaag
ataacactcactatcatccgtacaatggttgatttgatgtatgcaatcaagatatatgtt
aggttccgtacagcttatgttgcaccttcatcccgtttgcttggaagaggcgagctggtt
ctagattcctctagtatttctgagaggtatcttaagggtgaattctggctcgacttcttg
gccacccttcctgttccacaagtaatgacttggttccacattgttgatacaacagaaatg
atgagtacaaagacgagtgtcctatattttatcatgattcagttcttcttgaggctctat
ctcacatttagactcggaacccacatttctaagcaagcaggtcttgtggctaatgtggca
tgggttggggctgcttacaatctattgcttttcatgttggctgctcatgtgattggagca
atgtggtatcttttagggattgagaggcaagggctttgctgggtagaagtatgtgacgct
gaaacagaatgtaaacatcgatattttgactgtgtaaatgtgaatcttcctcttcgggaa
gcatggtatccaacgagcaatgtcacgcgtatatgtgctgataccaatgaatataaatat
ggactggttgaggattcagttggctacagtattgcttctgccactttctttaaaaaatac
tcctactgtctctggtggggactcagaggcttaagttctgcaggacaagaacttcaagcg
agtccatttcttgcagaatcacacttttgcatactcatagcgattactggattgattctc
tttgctttgttaattggcaatatgcaacaatacctcgagtcaagaactaaacgactagag
gagtacagggtgaaacgaatggataccgagcaatggatgcatcacaggcatctgccaaat
gagttaagagagcgtgtgcgtagacacgacctatacaaatggattacaacacgaggggtt
gatgaagaagaaattctccaggcccttccactagatatcaggagagagatcaaacgttac
gtctgtgctgagctcgttagaagggttcctctatttgatcaaatggatgagcgtactgtg
gatgcaatatgtgaaagactaaaacccatgatctgcacacctggaacttgcctagttcga
gaaggagaccccactaatgaaatgttgtttatcatgcggggtcacttagattcctacact
acaggcggggggagatctggtttcttgaaccaatgtgagattggcccgggtgacttctgt
ggcgaggagctgctgacgtgggcacttgacccacgtccaagtgtcatcattccatcatcc
acacgcacagtcaccgcgattactgaagtggaagcttttgctctcacatcagaagactta
aaatttgtggccacacagttccgtaagctgcacagcaagaaactaagacataccttcagg
gttcactcacaccaatggagaacttgggctgcttgtttcatacaagcagcttggaaacgg
tacaaaaggcgaaaactagctggacttctcagggctaaagagagtctcagcagacgaact
agatcagggagaaaggtaacgggcttatcgacattggaaacaggagtaagaagaggccgt
ggatatgacgatgatgatgtcattcgaagcccagttccaaaaccgaaggatccagagttt
ttagatgacagtcaccactga
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