Erigeron canadensis (horseweed): 122585516
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Entry
122585516 CDS
T07610
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122585516
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecad01002
]
122585516
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122585516
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122585516
Peptidases and inhibitors [BR:
ecad01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122585516
Ubiquitin system [BR:
ecad04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122585516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
122585516
NCBI-ProteinID:
XP_043613576
LinkDB
All DBs
Position
1:60026175..60031057
Genome browser
AA seq
1016 aa
AA seq
DB search
MGKKVKKRNARTAQKEKQVTNSSQKIIPTTMVDGASVAKEARVCPHLETGINFDNVTWKI
TSSESRKCDDCREVVVDRRASKGKQGKKKSGGSSSESTSIWVCLQCGHFTCGGVGFPTTP
HTHATRHAKQYQHPLAVKFANPNLRWCFRCDTIVPAQTTVDGEQKDILYNIVKLLKAPPS
SENSLDVEDVWFGSGSILNEIKTVNTSSSSEVSDGFRVKGLLNLGNTCFFNSILQNLLAM
DKLRDHFLRLEKPVGPLAASLKKLFIETNPSAGPQKVVNPWSLFNSVCAIAPQFKGYQQQ
DSHELLRFLLDGLCTEESKVQSFSPKHSSTFVDTIFGGQISSSVSCLECGHTSIVYEPYL
DLSLPLPTKKGLSKKMPLVSRSKKFKPPPKRRGKVGTKVNTVSHTSSSVSTPAVPTSFDS
LHAETNVIEKISEITIKDLDISSDKLALVNYVAPTSALNGNGNQTDDSSDQLSWLDYLDP
PMASSNHDAAAFVGDDMVMEEAILLQVMEASKQVDSHDLEETQTSTNNHDAAVFVGDDTV
SDEAILQQLMEATKQVNNDVFEETHSTNDHDAASSVRDGMVTDEAILQQVMEASKQIDSH
GLEEIQPSTNDWWLDYLEPSFSQNDQDMSSQHEQPSAVQDSGNGGDVLWEDEPPLIQESE
VLLLPYESLTATSNGNEVTLSSVSYEQEPSDFDGFGGLFDEPEVVSGPTVDPISNGARNN
SESDSDEVDNTDSQVSVDKCLSYFTTSELLTKAEHAWHCEHCSKALLEQRMKLKNKPLEL
VSNGAENGSSTISSDSGVEYSTCNGLQNDKSNGSRVGSELEENGNVVNGDRSSVTASSEA
SCAVQDLDFCNLDDPGDKCKDEKFQKRVSSRLARKNGSNGVEDEDSSSIKVTRDATKRIL
INRVPPILTVHLKRLSQDARGRLSKLSGHVDFKEIIDLKPYMDSSCKDRGTYRYRLIGVV
EHIGTMRGGHYVAYVRGGTKGNGDCLWYHASDAHVRQVSFEEVLRCEAYILFYEMI
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaaggtaaagaagagaaatgcccgaactgctcaaaaggagaaacaggtcaca
aactcttcacaaaagataatcccaacaacgatggttgatggagcgtctgttgcaaaagag
gcaagagtttgtcctcatctcgagactgggattaatttcgacaatgtcacctggaagata
acatcatctgagtctcggaaatgtgatgattgcagggaagtggttgttgatagaagggcg
agtaagggcaagcaaggtaagaaaaaaagtggcggttcatcatctgagtccacatccatc
tgggtgtgtttgcaatgtggacattttacatgtgggggtgtagggtttcctacaacacct
catactcatgccactaggcatgcaaaacaataccaacatccattggctgtcaaatttgca
aaccctaatctccggtggtgttttcgctgcgatacaattgttcccgctcaaacgacagta
gatggagaacaaaaagatattttgtataacattgttaaattattaaaggctccaccgtct
tccgaaaactctttggatgttgaggatgtttggtttggaagtggcagcatcttaaacgag
atcaagactgtaaatacctctagtagttcagaagttagtgatggctttagagtaaagggt
ttgcttaatttaggtaacacttgtttttttaattcaatattgcaaaatcttctagcaatg
gataaattgcgggatcacttcttgagattggaaaaacctgttgggcctcttgcagcttct
ttaaagaagcttttcattgaaactaatccatcagcaggtccccaaaaggtggttaaccca
tggtctcttttcaactctgtttgtgctattgctcctcaatttaagggatatcaacagcaa
gatagtcacgaattgcttcggtttttgctggatggattgtgtactgaggagtctaaagtg
caaagtttttctccaaaacatagttctacttttgtagataccatatttgggggacaaatt
tctagcagtgtcagctgtctggaatgtggacacacttcaatagtatatgaaccgtattta
gatctctcattaccattaccaaccaagaaaggtctatcaaaaaagatgccattggtttct
agatcaaagaaatttaaaccacctccaaaaagacgtggaaaagttgggacaaaagttaat
acagtttcccatacctcatcatctgtcagtactccagctgttccaaccagtttcgattcc
ttacatgcagaaacaaacgtgattgagaaaatctctgagatcacaatcaaggatctagac
atctcttcagataagttggcacttgtaaattatgttgcgccaaccagtgcattaaatggc
aatggtaaccagacagatgattcatctgatcagttatcatggttggattatctggaccca
cctatggcatcaagtaatcatgatgcagctgcatttgtcggtgatgatatggtcatggaa
gaggcaatattgctgcaggtgatggaggctagcaagcaggttgattcccatgatttagag
gaaacacaaacttcgacaaacaatcatgacgcagctgtgtttgttggtgatgatacggtc
agtgacgaggctattttgcagcagttgatggaagctactaagcaggtcaataatgatgtt
tttgaggaaacgcattcgacaaacgatcatgatgcagcttcatctgttcgtgatggtatg
gtcactgatgaggctatactgcagcaggtgatggaagctagcaagcagattgattctcat
ggtttggaagaaatacagccttcgacaaacgattggtggttggactaccttgaaccaagt
ttttcgcaaaatgatcaagatatgtcatcacaacatgaacagccatcagcagttcaagat
tctggaaatggtggtgacgttttgtgggaagacgagccaccattgattcaagagtcagaa
gttctattgcttccttatgaaagtctcactgcaactagtaacgggaatgaggtgacattg
tcttctgtcagttatgaacaagaaccatctgattttgatggttttgggggtttatttgat
gaacccgaggttgtttctgggcccactgtggatcccatttcaaatggagccagaaataat
agcgagtctgattcggacgaagttgataacactgattctcaggtgtctgtggataaatgt
ctatcttatttcacaacttccgagcttctcaccaaagctgaacatgcgtggcattgtgag
cactgttcaaaagctttgctagaacagaggatgaaactaaagaataaaccactggaactt
gtttcaaatggagccgaaaatggcagttcaactatttcatctgattctggtgttgaatat
tccacctgtaatgggctgcagaacgataaaagcaatggcagtagagtaggatctgagtta
gaagaaaatggtaatgtagtaaatggcgatagaagctcagttacagcttctagtgaagca
agttgtgctgtacaagatcttgacttttgcaacttagatgaccctggtgataaatgtaag
gatgagaaatttcagaaaagggtatctagtcgtttagctaggaaaaatggttccaatggg
gttgaggatgaggattctagcagtatcaaggtgacaagggatgcaactaagaggattctt
attaatagggtcccaccaattttaactgttcatttgaaaaggttaagtcaagatgctcgt
ggccgtttaagtaaattaagcggccatgttgatttcaaagaaatcatcgatcttaagccc
tacatggactctagctgcaaagacagagggacataccgataccgattgataggggtggtg
gagcatatagggacaatgaggggaggccattatgtagcatatgtgagaggaggtacaaag
ggtaatggtgattgtttatggtaccatgccagtgatgctcatgtccgacaggtttcattt
gaggaagttctaaggtgcgaggcatacattttgttctatgaaatgatttaa
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