KEGG   Erigeron canadensis (horseweed): 122585603
Entry
122585603         CDS       T07610                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03030  DNA replication
ecad03410  Base excision repair
ecad03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    122585603
   03410 Base excision repair
    122585603
   03420 Nucleotide excision repair
    122585603
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ecad03032]
    122585603
   03400 DNA repair and recombination proteins [BR:ecad03400]
    122585603
Enzymes [BR:ecad01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     122585603
DNA replication proteins [BR:ecad03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    122585603
DNA repair and recombination proteins [BR:ecad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      122585603
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 122585603
NCBI-ProteinID: XP_043613660
LinkDB
Position
1:complement(56672219..56687784)
AA seq 2200 aa
MNGSDRRRTDRRDTRISKKQKLILSAEEKLESKLGFDLFTEGDKRLGWLLTFSSSSWEDQ
DTQKVYSCVDLYFVCQDGSTFKAKYRFRPYFYVSTKDKMEMDVDAHLRRRYEGQIADIKV
VEKEDLDLKNHLSGLRKTYLKISFETVQQLMQVKSDLMHVVERNKEKSKASEAYEAILAG
KSTERNQDLIDCITDLREYDVPYHVRFAIDNDVRSGLWYDVNVSSDGIMLERRHDLLQRA
EVHVCAFDIETTKLPLKFPDAEYDLVMMISYMVDGRGYLIINRECVGEDIADLEYTPKPE
FEGHFKVTNVKNEVELLRLWFSHMREVKPGIYVTYNGDFFDWPFLENRAAHHGLRMNDEL
GFQCDTVQGECRAKFACHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVC
FAMEKPQMMASYSVSDAVSTYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLM
VQAYIANVICPNKHQAEPEKFHNGHLLESETYIGGHVECLETGVFRSDLPTSFKLDPSAF
KQLIDNLDRDLLYAIRVEGKMDIESVINYDEVKNAIMEKLITLRDEPTREECPLIYHLDV
AAMYPNIILTNRLQPPSIVSDEICTACDFNRPGKTCLRKLEWVWRGETYTAKRSDYYHIK
RQIESEFADGPKSKPFLDLPKVDQQLKLKERLKKYCQKAYKRVLDKPVTEIREAGICMRE
NPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNPIKIQEAQDMVVLYDSLQLAHKC
ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGRPLELDTDGIWCALPG
SFPENFTFKTIGSKKLTISYPCVMLNVDVARNNTNDQYQTLKDPVNRTYTTHSECSIEFE
VDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDK
FLHGSTLEECYSVVASVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLADYGEQKSC
AVTTARRLADFLGDTMVKDKGLRCQYVVACEPRGNPVSERAVPVAIFETDAEIMKFYVKK
WCKISSDIGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLHKKVREK
DDKMRQRKLVDIFSSVKKGNDEDPKIDANGNNHVTHEQNFVDLEDFGNNVNASTIGPRPI
VRSYETNHKRSGLTVSSKESSDHDQSENPLTSLQLIDIDGDVDRHLDYQGWLDSRKRKWK
LVREKRKRQRLDNLDKFNRRNGFAEIPSGVASKKQAHGTGVGSYYKRQEVALTSSHWQII
QLVPSSQHGHFSAWVVVDGVMHKIPISVPRVFYLNSKAPITEEFPGRRVTKNLPHGRHCY
NLIEVITDEDQFRKVSRKLSAHLADPEVEGIYETKVGLDFNSILQIGCVCKVDKSAKKRN
AKDGWSLSELHMKTTAECSYLASSIPFFYLYHSISEVRGIYLVYFPSSSIIHVVMVNPFP
NKELTTNILEKQFREACQALSIEPSMSGDVSSFKVDYVRNPKEAEKNLQKTIIEFRNQLH
GPAIALIECPDVDLIKSSVRALDDFPCVNIPSNARDSQYQALGWQIVAAKIGMQRCAVSS
HWLNERISLSRYSHVPLGNYELDWLIHTADIFFARALRDHQQILWVSDNGFPDLGGDIEE
ESCYSDEVNQPVFTTPGAYRKFTVELKIHHLSVNALLKSTRINDMEGGTLFGFDLALGSH
LPGEQIGVDEATSCSEAFRILKKLIQRCLADVIKYGNIFADAILQHLYRWLCSPRSKLHD
PALHRMLHRVMQKVFALLLAEFRKLGATIIFASFSKVILDTGKSDLIAAQAYCDSLLKTI
QTRDLFEYIELEPTQFWHSLLFMDQYNYGGIQDKQDQTNDGTHDDSQVDIVPSWNIAVNL
PAKAQDYFMYIVSDFMYLPWKFAQDETRKRATIREDDSCTPSITAAAAENFESRMTDHLR
KKIQSHFTNTLLRIVDDIDNNIKKTGKSQTAQDNNVYKGNPALEFIKHVCAVLALDQDVQ
QDILIMRRNLLKKVRVREFAPEAQFQVCSFSFTLPNVICSYCNDCRELDLCRDRGLLTQE
WRCSVPHCGQPYNREVMENSLLQIVRQRERLYHLQDLVCLKCKQIKAAHLAEHCACAGSF
ILKEDLTSFRNKMEVFLNIATHQKFELLKDCVSWILELKQ
NT seq 6603 nt   +upstreamnt  +downstreamnt
atgaacggcagcgatcggagaagaactgaccgcagagacactcggatttccaaaaaacag
aagctgattctgtcggccgaagaaaaactcgaaagcaaactcggcttcgatctatttacc
gaaggcgataaacgcctcggctggcttctcactttctcttcctcatcttgggaggatcag
gatacccaaaaagtatatagttgtgttgatttatatttcgtttgccaggatggttcgacg
tttaaagccaagtatcggtttcggccttatttttatgtttctaccaaggataagatggaa
atggatgttgatgcacatttaagacgacgatacgaagggcaaattgctgatatcaaagta
gtggagaaagaggaccttgatcttaaaaaccatctttctggattgcggaaaacctattta
aagatatcgtttgaaacggtacaacaacttatgcaagtaaagagtgatctaatgcacgtg
gtcgaaagaaataaagaaaagtctaaagcttcagaggcgtatgaggccatattggctgga
aaaagtactgagcgaaatcaagatttaattgactgcattactgatctccgggagtatgat
gtgccttaccatgtccgttttgccattgacaatgatgtaagatctggactgtggtatgat
gttaatgtgtcaagcgatgggattatgttagaaagaagacatgatctgttgcaacgtgct
gaagttcatgtttgtgcatttgatatagagaccacaaagcttcctctaaaatttcctgat
gccgagtatgatttagttatgatgatctcatacatggttgatggacgaggatatctgatt
atcaatagagagtgtgttggtgaagatatagcagatttggaatacacaccaaaacctgaa
tttgaaggacactttaaagttacaaatgtgaagaatgaggttgagctgctcagattatgg
ttctctcatatgagagaggtgaagcctggtatttatgtcacatacaatggagactttttt
gattggccattcttggaaaacagggcagctcaccatggcttgagaatgaatgatgagcta
ggatttcagtgtgatacagttcaaggtgaatgtcgtgctaagtttgcttgtcatctggat
tgttttgcatgggtcaaacgtgatagttatctacctcaagggagccatggtctgaaggct
gtcactaaagccaaactgggctatgatccattggaggtaaatcccgaggatatggtttgt
tttgcaatggaaaaaccccagatgatggcatcatattcggtatctgatgccgtgtcaacg
tattacttgtatatgacttatgttcatcccttcatcttctcacttgcaactataatacca
atgcctcccgatgaggtattgcgtaaaggaagtgggaccctttgtgaaatgctgcttatg
gtccaggcatatatcgctaatgttatatgtcctaataagcaccaagctgaaccagaaaag
tttcacaatggccaccttcttgaaagtgagacgtacattggtggccatgtggagtgccta
gaaaccggtgttttcagatctgaccttccaactagtttcaaacttgatccatcagctttc
aagcaacttatcgataatctcgatcgtgatctcttatatgctattagagtggagggtaag
atggacattgaatcggttataaactacgatgaagtaaagaatgctattatggagaagctt
ataacattacgagatgaacctacacgagaagaatgtccactcatttatcacttagatgtc
gctgcaatgtatcccaacattattttgacaaacagacttcagccaccatctatagtttca
gatgagatttgcactgcgtgtgatttcaatcgtccagggaaaacttgtcttagaaaactt
gaatgggtttggcgtggagagacatacacagcaaaaagaagtgattactatcatattaag
aggcaaattgaatccgagtttgctgatgggcccaaatcaaaaccatttcttgatctgcct
aaagtggaccaacaactgaagctgaaagagcgtctaaagaaatactgccaaaaggcatat
aagcgagtacttgacaagccagttactgaaattcgagaggcagggatatgcatgcgtgaa
aacccattttatgttgatactgtccgaagttttcgtgatagaagatatgaatacaaagga
ctgaataaagtatggaaggggaagttatcagaagcaaaggctagtggaaatccaattaag
atccaagaagcacaagatatggtggttctttatgattcgctacagctggctcataaatgt
attctaaattccttttatggatatgtcatgcgcaaaggtgcaagatggtactcaatggaa
atggcaggagttgttacttatactggagcaaaaataatacaaaatgcgcgtttacttgtt
gaaaaaatcggaaggcccctcgaattagacactgatggtatatggtgtgccttgccaggg
tcatttcctgaaaacttcacctttaaaacaataggatcaaagaagttaacaatttcatat
ccatgtgttatgctgaatgttgatgtggcaagaaacaacacaaatgaccaataccagact
cttaaagatcctgtgaacagaacatatacaacacacagtgaatgctccattgaatttgaa
gtcgatggaccatataaggcaatgattcttcctgcatctaaagaagaaggaattctaata
aagaagcgatatgctgtttttaatgatgatggtacccttgccgagcttaaaggcttcgag
ataaagaggaggggtgaactaaagcttatcaaagttttccaagcagaactctttgacaag
tttcttcacgggtctaccctagaggaatgctattctgtagttgcctctgttgcaaaccgc
tggcttgatcttcttgataatcaagggaaggatattgcagacagtgaattgcttgattat
atatcagaatcaagcactatgagcaagtctttagcagactatggtgaacagaaatcatgt
gcagtaaccacagcaagacgtcttgccgattttcttggtgatacaatggtaaaagacaaa
ggtctacgctgccaatatgttgttgcatgtgaaccacggggaaacccggtgagtgaacgg
gctgttcctgttgctatatttgaaactgatgcagaaattatgaagttttatgtgaagaaa
tggtgcaaaatctcatcagatattgggatacgatccattattgactggtcatattacaag
cagcgtcttagctctgctattcagaagattatcactattcctgcagcaatgcagaaggtt
tcaaaccctgtcccaagagtggttcatcctgattggctgcacaagaaggttcgtgagaaa
gatgacaaaatgcgacaaagaaagttagttgatatctttagttcagtgaaaaagggtaat
gacgaggacccaaaaattgatgcaaatggaaacaatcatgtaacccatgaacaaaacttt
gtggatttggaggactttggaaacaatgtaaatgcttctacaattggacctagacctatt
gttcggtcgtatgaaactaaccataagagaagtggactgacagtttcttctaaagaaagt
tctgatcatgatcaaagtgagaatcctctgacatcgttacaactgattgatattgatgga
gatgtagatagacatctggattatcaaggatggcttgattcgaggaagagaaagtggaaa
ctggttcgggaaaaaaggaagaggcaaaggctggacaatttggacaaatttaatcgaagg
aatggattcgctgagatcccaagtggtgttgcaagtaagaaacaagctcacggaactggg
gtcggttcttattataaaaggcaggaagtagccttaacaagcagccattggcagataatt
caacttgttccaagctcgcaacatggccatttttctgcatgggttgttgtggatggggtc
atgcataagatccctataagtgttcccagagtattttaccttaattctaaagctcctata
accgaagaatttcctggaaggcgtgtcaccaaaaatcttcctcatggtcggcattgctat
aacctgattgaggtcataactgatgaagatcaatttagaaaagtcagcagaaaactttct
gctcatcttgcagatcctgaggtggaggggatatatgaaacaaaagttggtctggatttt
aattctatcctccagattggatgtgtttgtaaagttgataagtcagctaagaaacgaaat
gcaaaagatggttggagtctaagtgaattgcatatgaaaaccactgcagaatgctcttat
ctagcatcttccattccctttttctacctatatcatagcatatctgaagtacgtggtatt
tatcttgtatattttccatcatcttcaattatccatgtggtaatggtcaatcccttcccc
aataaagagttaacaacaaatattttagagaaacagtttcgtgaagcttgccaagcttta
tcaattgaaccttccatgtctggggatgtttccagttttaaggtggactatgtccgaaac
cccaaagaagctgaaaagaatttacaaaaaacaataattgaattcaggaatcagcttcat
ggacctgcaattgctttaattgagtgcccagatgttgacttaataaagtcaagtgtgcga
gctttagatgatttcccctgtgtcaatattccttcaaatgctcgtgatagtcaatatcag
gctcttggttggcagatagtagctgcgaaaattgggatgcagcgttgtgctgtatcatct
cattggttaaacgaaagaatttctctttccagatattctcatgttcctttaggcaattac
gaactagactggcttatccacactgcagatatcttctttgcaagagcactgcgtgatcat
caacagatactttgggtatcagataatggatttccagaccttggaggggatattgaagaa
gagtcttgttactctgacgaggtcaatcaaccagttttcacaacacccggtgcttatagg
aaattcacagttgaactaaagattcatcatttgtctgttaatgctctgctaaagagcacc
cgaataaatgatatggaaggaggtaccctttttgggtttgatttggctttgggatcacat
ctgcctggcgaacagataggagtagatgaggccacttcttgttcagaggcatttcgtatt
cttaaaaagttaattcaaagatgtcttgctgacgtaataaaatatggaaatatatttgct
gatgcaatattacaacatttatacagatggctctgcagtccgcggtcaaaactccatgat
ccagctcttcatcgaatgcttcacagggttatgcaaaaggtgtttgcacttctgctagct
gagtttagaaagttgggtgccaccatcatttttgctagtttttcaaaagtaatattggac
accgggaagtcagacttaattgcagctcaagcttactgtgatagtttactgaaaactata
caaactagagacctgtttgagtatatcgagcttgaacccacacagttctggcactcactg
ttattcatggatcaatataactatggtggaattcaagataaacaagatcaaacaaatgat
ggcacacatgatgattcccaagttgatatagtgcccagctggaatattgcagtaaatctg
cccgcaaaggctcaggattattttatgtatatcgtttccgacttcatgtacctcccatgg
aaatttgctcaagatgaaaccagaaaaagagcaactataagagaagatgattcatgcact
ccatcaatcactgctgcagctgctgaaaattttgaatcacgcatgactgaccatcttaga
aagaagattcaatcccactttaccaatacattattgagaatagttgatgatattgataat
aacataaagaagacaggcaaatctcagacagctcaagataacaatgtctataaaggaaat
cccgcactagagtttataaagcatgtgtgtgctgtccttgctcttgaccaagatgtgcag
caggatatattgattatgaggaggaatcttttgaagaaagtacgtgtaagggagtttgct
ccagaggctcagtttcaagtctgttcattttccttcaccttaccaaacgtgatttgcagc
tactgcaatgactgtagagaactggacttgtgtcgtgacagaggtttactgactcaagag
tggagatgtagtgttccacattgtgggcaaccatacaaccgagaggtgatggaaaatagt
cttctacaaattgttcgccaaagagaacggctttaccatcttcaagacttggtttgttta
aaatgcaagcaaattaaagctgcacatttggccgagcattgcgcgtgtgctggatctttt
attctcaaggaagatttgacaagttttagaaacaaaatggaagtgttcttgaacattgcc
acacatcaaaaatttgaattactcaaagattgtgtttcttggattctcgaattaaaacaa
taa

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