Erigeron canadensis (horseweed): 122585607
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Entry
122585607 CDS
T07610
Name
(RefSeq) protein HIRA
KO
K11293
protein HIRA/HIR1
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecad03036
]
122585607
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
122585607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
ANAPC4_WD40
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_IFT140_2nd
Beta-prop_SPT8
Vps16_N
Motif
Other DBs
NCBI-GeneID:
122585607
NCBI-ProteinID:
XP_043613664
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Position
1:56540970..56546616
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AA seq
1021 aa
AA seq
DB search
MISEKPIWVRHEGMQIFSIDIQPGGLRFATGGGDHKVRIWNMKYVDKVLNLDPDKPKLEL
LATLRDHFGSVNCVRWAKHGRYIASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKIA
FTLRGHTADVVDLNWSPDDTTLASGSLDNTIHIWDVGNGICTAVLRGHSSLVKGVTWDPI
GSFIASQSDDKTVIFWRTSDWSLAHRTDGHWAKSIGSTFFRRLGWSPCGHFITTTHGFQK
PRHSAPVLERGEWTATFDFLGHNAPIIVVKFNHSMFKRNPTNTQEAKGGSAGWANGVSKN
GGKESQPYNVIAIGSQDRTITVWTTASARPLIVAKHFFLQSVVDLSWSPDGYSLFACSLD
GTVATFHFEVKELGQRLSDVELEELKKSRYGDVRGRQANLAESPAQLLLEAASKKVTENA
TNNNSSTIKSSSGLGIESKVQSLPDLGKNSVGVIDNASNKAVAPSNRLSSPVKQREYRRP
DGRKRIIPEPVGAPIQGENINVSGPSQSQAVDFSLRSTENGDSGFREGPPTKRVMVGGDM
RERSGVSARATVSESLVIEKVAASADKDGNFNIEAIGGPNNLGSSRSVKPLSIRVFDNKE
GGDTPHVCLEACLKEHAANDIIGVGSTFLMKETEISCTKNGQTLWSDRISGNVTVLAGNA
NFWAVGCEDGSLQVYTKCGRRSMPTMMLGSTPVFIDCDDSWKLLLVTRKGATYVWDLFNR
KCILHDSLASLMTSDPKSTGTVKVISAKLSKSGSPLVTLATRHAFMFDMSLMCWLRVADD
CFPASNFASSFSLGFPQNGELAALQVDVRKFLARKPGWSRVTDDGVQTRAHLETQLASAL
SLKSPNEYRQCLLSYIRFLAREADESRLREVCENFLGPPSGMAETVASDATNPAWDPCVL
GMKKHKLLREDILPAMASNRKVQRLLNEFMDLLSEYKTTNPVLELPAATSNMPSADQTTM
ALESTNETATVLPVTNEVQMASVSQPIDEELPGNHPPTSDKMDVDPPGTNKSNPILDEMT
S
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgatttctgaaaaaccaatttgggttcgtcatgaaggcatgcaaatcttttcgattgat
atacaaccaggtggtcttcgatttgctactggtggtggtgatcataaggtaaggatttgg
aacatgaaatatgtggacaaggtcttgaacttggatccagataagccaaagttagaactt
cttgctacacttcgtgatcattttgggtcagtcaattgtgttagatgggcaaaacatggt
cggtatattgcttcgggttcagatgatcaggttattcaaattcacgagaggaagcctggt
tctggaacaactgagtttggtagcggtgaggcacctgatgttgaaaattggaaaattgcc
tttactctgagaggccataccgctgatgtggtggatcttaattggtccccagatgatacg
actttggccagtggaagtttagataacacgattcatatatgggacgttggtaacggtatt
tgcacggctgttttaaggggtcattcgagtcttgtaaaaggggtaacgtgggatccaatt
ggttcttttatagcaagtcaatcagatgacaaaactgtaattttttggcgaacatctgac
tggagccttgcacacaggacagatggacactgggcaaaatcgattggatcaacctttttc
agaaggctcgggtggtcaccatgtggtcatttcataacaacgacccatggttttcaaaag
cctaggcattcggcacctgttctagagaggggagaatggactgctacctttgacttttta
gggcacaacgcccctataatagttgtgaagtttaaccattccatgtttaaaaggaatcca
acaaacacccaagaagcaaaaggtggttctgcgggttgggctaacggtgtctccaagaat
ggagggaaagaatcccaaccttacaatgttattgctattggaagtcaagatcgaaccatt
accgtgtggactactgcaagtgctcgacctttaattgttgcaaaacatttttttctacag
agcgttgttgacctgtcttggagcccagatgggtattcactgtttgcatgctctttagat
gggaccgtggctacttttcactttgaggtcaaagaacttggtcaaaggttaagtgatgtg
gagctagaggagctgaaaaagagccgttatggtgatgttagaggtcgacaagcaaattta
gcagaaagtcctgcacagttgctgcttgaagcagcttccaaaaaggttacagaaaacgca
acaaataataattcatccaccataaaatcatcttctggtttagggattgaatcaaaggtt
caatcgttgccggatcttggtaagaatagtgttggagttattgataatgcatcaaataaa
gctgtagctccttccaatagattgtcgagtcctgtaaagcaaagagaataccgacgacca
gatggccggaaacgaatcattccagagcccgtgggagctcccattcagggagagaacata
aacgtatctggaccttctcaatctcaagctgttgacttttctttgaggtctactgagaat
ggtgattcagggtttcgtgagggtcctcctaccaaaagggtaatggttggaggagatatg
agggagagatcaggtgtatcagcacgggccacggttagtgagagtttagtaattgaaaag
gttgccgcttctgctgataaagacggaaattttaatattgaagcgattgggggtccaaac
aatttgggttcttcgcgttctgttaaacccctatcaattagggtatttgataataaagag
ggaggagatacaccacatgtttgtttggaagcctgtcttaaagaacatgctgccaatgac
attattggggttgggagtacatttctaatgaaagaaacagaaatttcttgcacgaaaaat
ggtcaaactctttggtctgatcgtatctccggcaatgtcactgttttggccggaaatgcc
aatttttgggccgttggatgtgaagatggatcccttcaggtatacactaaatgtggaaga
cgctctatgccaacgatgatgttggggtcaacaccagtttttatcgactgtgatgattct
tggaaattattgcttgttacaagaaaaggagcaacatacgtgtgggatcttttcaaccgg
aaatgcattcttcatgactcattggcctcgttgatgacttctgacccaaagtcaactggc
acagtaaaagtcatatctgcaaagttatccaagtctggatcacctcttgttacactcgcc
acacgtcacgcattcatgttcgacatgagcctcatgtgttggctgcgtgttgccgacgat
tgcttcccggcttctaatttcgcaagttcgtttagtttagggttcccccaaaatggtgaa
ttggcagctctgcaagttgacgtgaggaaatttttggctagaaaaccgggctggagcaga
gtgactgatgacggagtgcagacacgggcccacttggaaactcagttagcgtctgcattg
tcattgaagtctccaaatgaatatcgacaatgtcttctttcatatatacggtttctggca
agagaagctgacgagtctcgactgcgtgaagtgtgtgagaattttcttggacctccgtcc
gggatggctgaaaccgttgcttctgatgcaacaaatcctgcatgggatccttgtgttctt
gggatgaagaagcataaactcttaagggaagacattcttccagcaatggcatcaaaccgc
aaagttcaaaggctgcttaatgaatttatggatcttttatctgaatacaagactaccaac
ccagttctggaattgcccgctgccacaagcaacatgccatcagcagatcaaaccactatg
gcattggaatcaacaaatgaaactgccactgtactgccagtaacaaatgaggttcaaatg
gcctctgtctcccaacccatagatgaagagctacctgggaaccatccacctacatctgat
aaaatggatgttgatccaccaggaaccaacaaatccaacccaatcctagatgaaatgact
tcttga
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