Erigeron canadensis (horseweed): 122585691
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Entry
122585691 CDS
T07610
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122585691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecad03009
]
122585691
Ribosome biogenesis [BR:
ecad03009
]
Eukaryotic type
Pre-60S particles
GTPases
122585691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
GTP_EFTU_D2
EFG_III
EF-G_D2
SRPRB
EFG_IV
Motif
Other DBs
NCBI-GeneID:
122585691
NCBI-ProteinID:
XP_043613747
LinkDB
All DBs
Position
1:complement(34280615..34283821)
Genome browser
AA seq
1022 aa
AA seq
DB search
MDNTYNYDCKSIRNICILAHVDHGKTTLADHLIASSGGNLLHHKQAGKVRFLDFLDEEQR
RAITMKSSSIALRYKTYSINLIDSPGHMDFCSEVSTASRLSDGGLVLVDAVEGVHIQTHA
VLRQAWIEKVTPCLVLNKIDRLIVELKMTPMEAYTRLLRIVHEVNGIVSAYKSEKYLSDV
DSILVGTVGDENQEFVEDDEEDTFQPQKGNVLFACALDGWGFSICEFAEFYASKLGASSA
SLQKALWGPRYFIPKTKMIVGKKGLAAGSKARPMFVQFVLEPLWQVYEAVLATDGDKGIL
EKLIKSFNLSVPPRELHNKDPKAVLQSVMSKWLPLSEAILSMVVKHMPDPITAQSFRVSR
LLPKREILDNDLSNSDVLAEAELVRKSVEACDSQPEAPCVAFVSKMFAVPIKMLPQRDVN
GDILNNYAEESGSGDSDECFLAFARIFSGALQSGQKVYILSALYDPLKTGDAVQKHIQEA
ELHSLYLMMGQGLEPVATARAGNIVAIRGLGQHILKTATLSSTKNCWPFSSMTFQVSPTL
KVAIEPSDPADMAALMKGLRLLNRADPFVEVSVSARGEHVLAAAGEVHLERCIKDLKDRF
AKVNLEISTPLVSFRETIEGDSSNPFEKIKALSGSSNFIERVTPNGRCTVHVHILKLPDA
LTKLLDESSDLLEDIIAGKAIVKSSTGGQDDDHPVESLRKRIWDAIESEVSEENAEKDKE
KYKLLWGNLLKRIWSLGPRQVGPNMLLLPDVITNDNGSSVLIKSSPYVSERLGFVDVSVT
DKLESETSTSAKTRSLIEEAESLRSSVLSGFQVATASGPLCDEPMWGLAFVIEAAILPFV
SETEAIHQQVQTDQYGVFSGQVMTAVKEACKAAVLQKNPRIVEGMYFCELNTPTEYLGPM
YSVLARRRARILKEEMQEGSPLFTVHAYLPVAESFGFADELRRWTSGASSALLVLSHWEA
LPEDPFFVPKTEEEKEEFGDGSSVLQNTARKLIDGVRRRKGLPVEEKVVQHATKQRTLAR
KV
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggataatacttacaattatgattgtaaatctataagaaacatatgcattcttgcacat
gttgaccatggcaaaacaacacttgctgatcaccttattgcatcatctggtggtaatctt
ttgcaccacaaacaagccggcaaggttcggtttttggattttctcgacgaagaacaacgt
cgagctataacgatgaaaagttcatctattgcccttagatataagacttattcgataaat
ttaattgattcccctggccatatggacttttgtagtgaggtttcaaccgcttcgcggtta
agtgacggtgggttggttttagtagatgcagttgagggtgtgcatatacagacgcacgcg
gttttgagacaagcgtggattgaaaaggttacaccgtgtttggttttgaataagattgat
aggttgattgttgagttgaagatgactcctatggaagcgtatactcggttgttgaggatt
gttcatgaggttaatggtattgttagtgcttataagtctgaaaagtatttatcggatgtt
gattctattcttgttgggacggttggggatgagaatcaggagtttgtagaggatgatgag
gaagatacgtttcaaccgcagaagggtaatgttctgtttgcttgtgcgttggacgggtgg
gggtttagtatctgtgagtttgctgagttttatgcttcgaaacttggggcgagttctgct
agtttgcagaaggcattatggggtcctaggtattttattccaaaaacaaagatgattgtg
ggtaagaaaggattggctgctggaagtaaggctcgtcccatgtttgtgcagtttgtgctt
gagccgttatggcaagtttatgaagcagtattggctactgatggtgataaagggattctt
gagaagttgattaagtcgtttaatttgtctgtacctcctcgtgagctacataataaagat
ccaaaagctgtattacaatcggttatgagcaagtggcttcctctatcggaggctatattg
tctatggtagttaaacatatgccagaccctattactgcacaatcatttcgtgtgtcacgt
ttgcttcctaaaagagaaatattagataatgatttaagtaactccgatgtgcttgctgag
gcagagctagtaaggaagtctgttgaggcttgtgattcacaacctgaagctccatgtgtt
gcttttgtgtctaagatgtttgcagttcctataaaaatgttaccccaaagagacgtaaat
ggtgatatattgaataattatgcggaggaaagtgggagtggagactctgacgagtgtttt
cttgcatttgcaagaatctttagtggcgctcttcaatcgggccagaaggtttatattcta
tcagctttgtatgatccacttaaaacaggagatgcggttcagaaacatattcaagaagcc
gagttgcattctttgtatctaatgatgggtcaagggctagaacctgtggctactgctcgg
gcaggaaatattgttgctattagaggcttaggtcaacatatcttgaaaactgcgactctt
tcatcaacaaagaactgttggccattttcaagcatgacgtttcaggtttcaccaacactt
aaagtggcaatagaaccttctgatccagccgatatggctgcacttatgaaagggctaagg
cttttgaaccgtgcagacccatttgtagaggtcagtgtttctgctcgaggggaacacgtg
ctcgctgctgcaggtgaagttcatttggagagatgcattaaagatttaaaagacaggttt
gcaaaggttaacctagaaatctcaacacctcttgtgtcctttagagaaaccattgaaggg
gactcatcaaacccttttgaaaaaataaaagctttgagcggtagttctaactttattgaa
agagttacaccaaatggtaggtgcaccgttcatgtgcacattctgaaacttcctgatgcg
ctgactaaattgctggatgaaagttccgatcttcttgaagatattattgcaggtaaagca
atagttaaatcaagcactggaggtcaagatgatgaccatcctgtagaatcacttagaaaa
cgtatatgggatgcgatagaaagtgaagtttctgaggaaaatgcagagaaagataaggaa
aaatataaacttctgtgggggaatcttttaaagaggatctggtcattggggccaagacaa
gtaggtcctaacatgctacttcttcctgatgtaattacaaacgacaatggttcttctgtt
cttataaaaagttccccatatgtatctgaaagattggggtttgtagatgtttcggtaact
gataagttagaaagtgagacgtcaacaagtgccaaaactcgatcactgatcgaagaagca
gagagcctcaggagcagtgtattgtctggatttcaagtagccactgcatccggcccgtta
tgtgatgaaccaatgtggggtttagcatttgtaattgaagctgccattttgcctttcgtt
agcgagactgaggccattcaccaacaagttcaaacagaccaatatggggtgttttccggg
caggttatgactgctgttaaagaagcatgtaaagcagccgtacttcaaaagaacccacga
atcgttgaaggaatgtatttctgtgaattaaatacgcctacagaatatttaggcccaatg
tattctgtgctggcccgcagacgggctagaattttgaaagaagaaatgcaagaagggtcg
ccattgttcacagttcatgcttatctgccagttgctgaaagttttggttttgctgatgaa
ttaagaagatggacttctggggcttctagtgcccttcttgttcttagtcactgggaggca
cttcctgaagatcccttttttgtaccaaaaacagaagaggagaaagaagagtttggagat
ggttcgagtgttttacaaaatactgcaagaaagctaattgatggggtcagaaggcgcaag
ggtctccctgttgaggaaaaggtggtgcaacatgctacgaaacagagaactctagctcgt
aaggtttaa
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