Erigeron canadensis (horseweed): 122585699
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Entry
122585699 CDS
T07610
Name
(RefSeq) putative SNAP25 homologous protein SNAP30
KO
K18211
synaptosomal-associated protein 25
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122585699
Membrane trafficking [BR:
ecad04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-25
122585699
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
Laminin_II
DUF5089
DUF5798
RmuC
Sec20
DUF1664
Snapin_Pallidin
NPV_P10
PCDH15_12th
DUF2959
COG6_N
Motif
Other DBs
NCBI-GeneID:
122585699
NCBI-ProteinID:
XP_043613757
LinkDB
All DBs
Position
1:41940650..41942848
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AA seq
280 aa
AA seq
DB search
MGFFRKAASPGPNSESETEKKDVPARRTTSEPVLPVPDSKNPFDDEDDDDFFGKAKTSTL
RKGQKSKAELDGMSNQELEHYAVDQAEETTKSVNNCLKIAEDIRQDANKTLDTLHAQGEQ
IHRTHEKAADMEKDLSKGEKILGSLGGMFSATWKPKKGKEIKGPDAIDDGKAGKKASKGD
REKLGLDHGHHKEKKDKKGHKKASGEPKDAMEKVEMEKEKQDEALDELSSVLGDLKGMAG
EMGSELDRQNKALDSLSEDVDEINNRVKGANTRARKLISK
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgggtttttttagaaaagcagcttcacccggtcctaatagtgaatccgagacagaaaag
aaagatgtacccgccagaaggactacttctgaaccagtactccctgtcccagactctaaa
aacccttttgatgatgaagacgatgatgactttttcggtaaagccaaaacatcgactctt
aggaaagggcagaagagtaaagctgagcttgacggcatgtctaatcaggaattagaacac
tacgccgtggatcaggctgaagaaaccactaaaagtgtaaataactgcttgaaaatagca
gaagatatcagacaagatgctaacaagactcttgatactttgcatgctcaaggggaacaa
attcataggacgcatgagaaagccgctgatatggaaaaagatttgagcaagggcgaaaag
attttggggagccttggtggtatgttctctgcaacttggaagccaaagaagggcaaggag
atcaaagggccagatgcaatagatgatggaaaagccggaaagaaagcaagcaagggagat
agggagaagttggggttggatcatggacatcataaagagaagaaagacaaaaagggacat
aaaaaagcttcaggtgaaccaaaggatgccatggagaaagttgaaatggagaaggaaaag
caagacgaggcgttggatgaactaagcagtgtattgggtgatcttaagggaatggctggc
gagatgggatctgaactcgacaggcaaaacaaagctctggatagtctttcagaggacgtt
gacgagataaacaaccgagtcaaaggtgcaaatactcgtgctcgtaaattgatctcaaag
taa
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