Erigeron canadensis (horseweed): 122585807
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Entry
122585807 CDS
T07610
Name
(RefSeq) LOW QUALITY PROTEIN: myosin-11-like
KO
K10357
myosin V
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122585807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122585807
04131 Membrane trafficking [BR:
ecad04131
]
122585807
03029 Mitochondrial biogenesis [BR:
ecad03029
]
122585807
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ecad04812
]
122585807
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
122585807
mRNA cycle factors
P-body specific factors
122585807
Membrane trafficking [BR:
ecad04131
]
Others
Actin-binding proteins
Myosins
122585807
Mitochondrial biogenesis [BR:
ecad03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
122585807
Cytoskeleton proteins [BR:
ecad04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
122585807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
AAA_22
nSTAND3
Flp1_like
Motif
Other DBs
NCBI-GeneID:
122585807
NCBI-ProteinID:
XP_043613867
LinkDB
All DBs
Position
1:33950779..33960257
Genome browser
AA seq
1433 aa
AA seq
DB search
MMQQYKGAPFGELSPHVFAIADTSYRAMINEGKSNSILVSGESGAGKTETTKMLMRFLAY
LGGRKATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKHGRISGAAIR
TYLLERSRVCQVNDPERNYHCFYLLCAAPPEEVEKYKLGSPKSFHYLNQSKCFELVGVND
AHEYLATRRAMDIVGISKKEQEAIFRVTAAILHLGNIEFTKGKEVDSSVLKDDQAKFHLK
MTAELLMCDPVGLQDALCKRVMITPEEVIKRSLDPLSASFSRDGLAKTIYSRLFDWLVDK
INVSIGQDLHSKSLIGVLDIYGFESFKNNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYK
KEAIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSNKLYQTFKNHKRF
IKPKLSRTDFTIAHYAGEVCNSEKDMFLSVTLLSXYXSTKYSXVQYQSDQFLDKNKDYVV
PEHQDLLSASKCSFVAGLFPTVSEESSKSSKFSSIGSRFKLQLQQLMETLNATEPHYVRC
VKPNNKLKPSIFENVNILQQLRCGGVLEAIRISCAGYPTRRAFFEFINRFGVLAPEALAG
SNFDEKTACTKILEKMGLSGFQIGKTKVFLRAGQMAELDARRAEILGNAAAIIQRRIRTH
IAHKQIGELRKASIFLQAFGRGRLACKKFEELKRIAAAIKIEKHVRKWHAWVAYTRLRVS
VLAVQTCLRAVEARKRYIFRKETNAAIKIQTRWRCHKYTAYYRRLKKGTIVTQCRWRGRI
AKRELRKLKMAARETGALKEAKDKLEKQLEELTWRLQLEKRLRTDLEEAKAQEAQKFQNS
LDAMQKKLDEANAMAVKEREVAKKAINEAPSLVEEKEIVIEDTKKVESLTQQVGDLKSKW
QSEKKRADDLEECCEERRKKLEETERKVVQLQEYMGRLEEKLNNLESENKVFRHQAVSLA
PNKFLSGRSRSIIQRNDSGTLIGETKSPRDPHSPLMNRDLAETDDTPQKSLDEKQKENQE
LLIRCIGQHLGFAGNRPIAACIIYKSLLQWRSFEVEKTTVFDRIIQTMGNAIEKTQDNND
VLAYWLSNASTLLLLLQRTLKASGAGSGIGPQRRRSSATLFGKMTSSFRGTPHTLDLSFA
NGSLGNGVEGYSKVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGMCIQAPRIS
RASLVKGSSRSVSSTAQQTLIAHWQGIVKSLGSFLNILKTHHVPPFLVRKIFTQIFSFVN
VQLFNSLLLRRECCSFSNGEYVKAGLAEIEHWCYNATEEYAGSAWDELKHIRQAIGFLVI
HQKPKKTLDEISRSLCPVLSIQQLYRISTMYWDDKYGTHSVSADVISRMRVLMTEESNVI
SNSFLLDDDSSIPFSVDDISKSMDQIDISDIEPPPLLRENSEFSFLLPRIENH
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaacaatacaaaggagcgccgtttggagagttgagtcctcatgtatttgcaatt
gcagatacatcttacagggccatgattaatgaaggaaaaagcaattcaattctagtgagt
ggtgaaagtggagcaggtaaaaccgagacaaccaaaatgcttatgcggttccttgcatac
ttgggtggccggaaagctactgaaggccgcacagttgaacagcaagtccttgaatcaaat
ccagttcttgaagcatttggcaatgctaaaactgttagaaataacaattccagccgtttt
ggtaagtttgttgagatccaatttgataagcatggaagaatatctggggcagccattagg
acgtacctcttggaaagatcccgtgtttgccaagtaaatgatccagaaagaaactatcat
tgtttttaccttctttgtgcagcaccacctgaggaagttgagaagtataaattggggagc
ccgaaatcatttcattatcttaaccagtcaaaatgttttgagttggttggggtgaatgat
gcacatgaatatcttgccacaaggagggccatggacatcgttggaattagcaaaaaggaa
caggaagcaattttcagagttactgccgccattcttcatcttggaaatatagaatttact
aaaggcaaagaggtagattcttcagtgctaaaagatgaccaagctaaatttcatcttaag
atgacagcagaacttcttatgtgtgaccctgttgggttgcaagatgcattgtgcaaacgc
gtgatgatcactcctgaagaagttatcaagaggagtctcgatcctcttagtgcatcgttc
agtagggacggtttggctaaaaccatctattctagattattcgattggttggtggataaa
attaatgtatcgattggacaagatctacattcgaaatctcttattggcgttcttgatatc
tatggctttgagagctttaagaacaacagctttgagcaattctgcattaacttcacaaat
gagaaactgcagcagcactttaaccagcatgtcttcaagatggagcaagaagaatataaa
aaggaggctattgattggagctacatagaatttgtcgataaccaagatgttttagatctc
attgaaaagaaacctggtggtatcattgctctgcttgatgaagcttgtatgttcccaaag
tcgacgcatgagacattctcaaacaagctctatcaaactttcaaaaatcacaaacgcttt
atcaagcccaagttgtcacgcacagattttacaatcgcgcattatgctggagaggtatgt
aattcggaaaaagatatgtttctatccgtaacactactttcttgatattaaagtactaaa
tattcttaggttcaataccaatctgatcaatttcttgacaaaaataaagattatgtggtt
cctgaacaccaagatttgttgagtgcttccaaatgttcctttgtagccggccttttccct
actgtatctgaagagtcctccaaatcttcaaagttttcttcaattggttcccgtttcaag
cttcaattgcaacaactaatggaaacactaaatgctacagagccacactatgttagatgc
gtaaaaccaaacaataagttaaagccttccatatttgagaacgtcaatatcttgcaacaa
ttgcgatgtggtggtgttctagaggctattagaatcagttgtgctggttatccaacccgt
cgtgctttctttgagttcataaacagatttggagttcttgcaccagaagccttagcagga
agtaactttgatgaaaagacagcatgtacaaagatcttggaaaagatggggctcagtggc
tttcagattggtaaaacaaaagtattcttaagggctggtcaaatggctgaattagatgca
aggagagccgagatcctcggcaatgcagcagcaattattcaaaggagaataagaactcat
attgctcacaagcagataggtgaattgcggaaagcttcaattttcttacaagcgtttggt
agaggtagattggcttgcaaaaagtttgaagaactgaaaaggattgcagctgctataaaa
attgagaagcatgtgcgtaaatggcatgcttgggtagcctatactcggctccgggtgtca
gtgcttgcagttcaaacatgtctgcgtgcagttgaggctcgtaagagatacatattccgt
aaggaaaccaacgctgcaataaaaatacagactcgttggcgttgtcataaatatactgcc
tactatagaagactaaagaaaggaaccatagttacacaatgcagatggaggggaagaatt
gcaaagagagagttgcgaaaactcaaaatggctgcacgggaaacaggtgcacttaaggaa
gcaaaagataagctcgagaaacaattggaggaattaacatggcgtttacaattggagaaa
cgcttaaggactgacttggaagaagcaaaagcacaagaggctcaaaaatttcaaaattct
ctagatgctatgcagaaaaaacttgatgaagcaaatgcaatggcagtaaaggaaagagaa
gtggctaaaaaagctatcaatgaagcaccctcgcttgttgaggaaaaagagattgtcatt
gaagatacaaaaaaagttgaatccctgactcaacaagttggtgatttgaagtccaagtgg
cagtcagaaaagaaacgcgctgatgatctggaagaatgttgtgaagaaagacgcaagaag
ctggaagaaacggaaagaaaagttgttcaattacaggaatatatgggcagactggaagag
aaactaaataacttagaatcagagaacaaggtgttccgccatcaagcagtgtccttggcg
cccaataagtttctctctggccgttctagatctattattcagaggaatgatagtggtact
ttgattggagaaacaaagtcacctcgggatccgcatagcccattaatgaaccgggatctt
gcagaaacagatgacacaccacaaaagtcacttgatgagaaacaaaaggaaaatcaggag
ttgcttattagatgcattgggcaacatcttgggtttgcagggaacaggcccattgcagca
tgtatcatttacaaaagccttctgcaatggagatcttttgaggttgagaagaccactgtg
tttgaccgtatcattcagaccatgggcaatgcaatagagaaaacacaggataataacgat
gtattggcctactggttgtcaaacgcctctactcttttgcttctactccagcgcacactg
aaagcaagtggggccggatctggtattggtccgcagcgtaggcgatcatcagctactctt
tttgggaaaatgacttctagttttcgtggaactcctcacacactcgatctttcctttgcg
aatggaagcctgggtaacggagtggaaggttatagcaaagtggaagccaagtaccctgct
ttgctttttaagcagcagcttacagcatatgttgaaaagatatatggaatgatccgagat
aatctgaaaaaagaaatatctccattgcttgggatgtgcattcaggcaccaagaatatct
cgagcgagtttagtgaaaggatcatcacgatcagtttctagtacagctcagcaaacgcta
attgctcactggcaaggaattgtgaagagtcttggaagtttcttgaacattttaaaaaca
catcatgtaccaccatttttggtccgtaaaattttcactcaaatattctcatttgttaat
gttcagctatttaacagtttacttttgaggcgtgaatgctgttcattcagtaatggcgag
tatgtcaaagcaggattggctgaaatagaacactggtgttacaatgcgactgaagagtat
gcaggttcagcttgggatgaactgaagcatataaggcaggctattggatttctggttata
catcaaaagccaaagaaaactctggatgaaataagtcgcagcctctgcccagtcctaagt
atacagcagttgtatcggattagtacaatgtactgggatgacaagtatggcacacacagt
gtctctgcagatgttatatcccgcatgagggtgttgatgactgaggaaagcaatgtcatt
agtaattctttcctattggatgacgattccagcattccattctcagttgacgatatatca
aaatcaatggatcaaatagacatttcagacatcgagcctccacctctacttcgggagaac
tcagaatttagctttctgttaccacgtattgagaatcactga
DBGET
integrated database retrieval system
