KEGG   Erigeron canadensis (horseweed): 122585860
Entry
122585860         CDS       T07610                                 
Name
(RefSeq) SKP1-like protein 13
  KO
K03094  S-phase kinase-associated protein 1
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03083  Polycomb repressive complex
ecad04120  Ubiquitin mediated proteolysis
ecad04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122585860
   04120 Ubiquitin mediated proteolysis
    122585860
  09126 Chromosome
   03083 Polycomb repressive complex
    122585860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ecad04131]
    122585860
   04121 Ubiquitin system [BR:ecad04121]
    122585860
   03036 Chromosome and associated proteins [BR:ecad03036]
    122585860
Membrane trafficking [BR:ecad04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    122585860
Ubiquitin system [BR:ecad04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     122585860
   Cul7 complex
     122585860
Chromosome and associated proteins [BR:ecad03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     122585860
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     122585860
SSDB
Motif
Pfam: Skp1_POZ Skp1
Other DBs
NCBI-GeneID: 122585860
NCBI-ProteinID: XP_043613942
LinkDB
Position
1:46237066..46237787
AA seq 157 aa
MSSKPIVLVSSEGEKFTTDESVAVQCKTIHHLIEDGCADSDIPVHNVTGKILSKVIEYCE
KHAKSPNNTDDDQTDEELKAFDAGFYDFVNDQKTAFDIMLAANYLDNKSLLELGCKKVAE
SVKGLTTRDIRKLYRIRNDFTPEEEAKVQEENAWSFD
NT seq 474 nt   +upstreamnt  +downstreamnt
atgtcgtctaaacccattgtgctcgtgagttccgaaggagagaagttcactactgatgag
tccgtggccgtgcaatgtaaaacaatccaccacttgatcgaagatggatgtgctgattcc
gatattcctgttcacaacgtcacaggcaagatactttcaaaggtgatcgagtattgtgag
aagcatgccaagtcaccaaacaacacggatgatgatcagactgatgaggagctcaaggcg
tttgatgccgggttttatgatttcgtgaatgatcaaaaaactgcttttgatattatgctg
gctgcaaactatctggacaacaagagtctactggagctagggtgtaagaaagttgctgaa
tcggtgaaaggattgactactagggatattcgcaagctgtaccgcatcaggaacgacttc
actcccgaagaagaggcgaaggtccaagaagaaaatgcctggtcttttgattga

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