KEGG   Erigeron canadensis (horseweed): 122585915
Entry
122585915         CDS       T07610                                 
Name
(RefSeq) syntaxin-125-like
  KO
K08486  syntaxin 1B/2/3
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    122585915
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ecad04131]
    122585915
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ecad04147]
    122585915
Membrane trafficking [BR:ecad04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    122585915
Exosome [BR:ecad04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   122585915
  Exosomal proteins of other body fluids (saliva and urine)
   122585915
SSDB
Motif
Pfam: Syntaxin SNARE DUF6548 ATG17_like ALIX_LYPXL_bnd DUF6261 DHC_N2 LMBR1 LarA_C DUF1664 MCPsignal Syntaxin_2 STX6_10_61_N Orf78 CCDC-167 DUF7201
Other DBs
NCBI-GeneID: 122585915
NCBI-ProteinID: XP_043613968
LinkDB
Position
1:15073015..15074139
AA seq 300 aa
MNDLFSNSFKQCQDNDLEAGGGGGNDTGELDKFFQDVENVKEDMAGVDKLYKRLQEANEE
SKTVHNAKNMKQLRAKMDSDVEQVLKRVRVIKGKIEALDKSNIANRKLLGCGPGSSADRT
RTSVVSGLGKKLKSMMDDFQSLRSRMNEEYKETVARRYFTITGERANDELIENLISNGEG
EDFMQKAIQDQGRGQIMDTISEIQERHDSVKEIEKNLIELHQVFLDMAALVEAQGQQLND
IESHVSHASSFVHRGTEQLVEARELQKNSRKCTMIAIFLVIIFVIVVLYPIWFPMLINSI
NT seq 903 nt   +upstreamnt  +downstreamnt
atgaatgacttattctccaattcatttaaacaatgtcaagataatgatttggaggctgga
ggaggtggtgggaatgacacaggggaacttgacaagttcttccaagatgtcgagaatgtc
aaggaagacatggccggggtagacaaactctacaagaggttacaagaggcaaatgaggaa
agcaagacggtccataatgccaagaacatgaaacaactcagagccaagatggactctgac
gttgagcaagtgttgaagcgtgtgagagtcattaagggaaagattgaggcacttgataag
tctaatatcgccaatcgcaagctccttggttgtgggcctggctcgtcagctgacaggaca
cgaacatctgttgttagtggtttggggaaaaagcttaaatccatgatggatgactttcaa
tccctgcgatcccgtatgaacgaagagtacaaggaaactgtcgcaagaagatacttcacc
atcacgggtgagagggcaaatgatgagttgattgaaaatcttatctctaatggcgaaggt
gaagatttcatgcaaaaggcaatccaagatcaaggtcgaggtcaaattatggacactatc
tctgaaattcaagaaaggcatgattctgtgaaagaaatagaaaaaaacttgattgaactc
catcaagttttcttggacatggccgcactagttgaggcccaagggcaacaattgaatgat
atcgagagccacgtgtctcacgctagttcattcgtgcaccgtgggactgaacaactagtt
gaagccagagagttgcaaaagaactcgaggaaatgcaccatgatcgccattttccttgtt
atcatatttgttatcgtcgtactttacccaatttggttcccaatgttgataaatagcatc
taa

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