KEGG   Erigeron canadensis (horseweed): 122585950
Entry
122585950         CDS       T07610                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
ecad  Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ecad03016]
    122585950
Enzymes [BR:ecad01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     122585950
Transfer RNA biogenesis [BR:ecad03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    122585950
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4 zf-CCCH zf_CCCH_4 zf-CCCH_2 DEAD_2 SERF-like_N PEP_mutase
Other DBs
NCBI-GeneID: 122585950
NCBI-ProteinID: XP_043613999
LinkDB
Position
1:complement(10041661..10054097)
AA seq 692 aa
MAAPATEVTVGEQPPKEPPQPPARKPITEMTVEEMVAKAIVPVKKEFIIPLPKRLTDNEN
GSSNDVVPASTISAPPPVSKEKKSKRQLKRERNQEKQSTRNLCPMVAKGGKLDSCPYGDK
CRFSHDIEAFIAQKPADLEGNCPFDSDKGACPYGLGCRYLGTHRTEVSAATPNCREESEV
NGLKKDVQKLLWKNKMQFPKADAKLKALGLMGPSKLKKAPNADEKEDSQTILNGSHLTNG
NGSGEVAAQLIVDNGCCPEVHEKLEDINGADDPRPLKKGKSLNDETFDPIEETNGASLEE
KDLDTSSAQLEPLSTADHVETDKSLKSHPREKKLIDFRDKLYLAPLTTVGNLPFRRVCKS
FGVDITCGEMAMCTNLIQGQAAEWALLRRHVSEDLFGVQICGAYPDTVARAAELIEQECS
VDFIDINMGCPIDLVVSKGAGSALLSKPMRMKNLIHAVSSTVDIPITIKARTSYYEGRSR
IDSVIADVAQWGASAVTIHGRSRQQRYTKQPDWEYVYQCTRKAPDTLQVLGNGDIFSFSD
WNKHKSNCPELSSCMIARGALVKPWLFTEIKEQRDWDISSGERLNILKDYVRFGLEHWGS
DTKGVETTRSFLLEWLSYTYRYVPVGLLEVLPQRLNSRPPAYFGRDDLETLMASESAVDW
IKISEMLLGKVPVGFSFSPKHKSNAFDKAENG
NT seq 2079 nt   +upstreamnt  +downstreamnt
atggcagcaccggcaacggaagttaccgtcggagaacaaccaccgaaggaaccgccgcag
ccaccagctagaaaaccgataactgaaatgacagtagaagagatggtggcgaaagcaatt
gttccggtaaaaaaggaatttattattcctctacccaaacgactgactgataacgaaaat
ggctcatcaaacgacgtcgttcctgcctcaaccatttcagctccgccgcctgttagtaag
gaaaagaaatcgaaacgacagcttaaaagagaacgcaatcaggaaaagcaatcaacacgt
aacctctgtcctatggttgcaaagggaggaaaactagattcatgtccttacggtgataag
tgtcgttttagccatgacatagaagcattcatagctcagaaacctgctgatttagagggc
aactgcccgtttgacagtgataaaggtgcatgcccctatggattgggttgtagatatcta
ggtacacatagaactgaagtatctgctgcaactccaaattgtcgagaggaatctgaagtc
aacggactgaagaaagatgtccaaaaactattgtggaagaacaaaatgcagtttcctaag
gcagatgctaaacttaaagctcttggtctaatgggtccatcaaaattgaaaaaggcaccg
aatgctgatgaaaaagaagacagtcagacaattttaaatggttctcatttgacaaatgga
aacggcagtggtgaagttgctgctcaattgattgttgacaacggatgttgtccagaagtt
catgagaaacttgaagacattaatggtgctgatgatcctaggcccctaaagaaaggaaaa
tcgttaaatgatgaaacgtttgatcccattgaagaaaccaatggtgcaagtctcgaggag
aaagatcttgatacaagtagtgcacagttagagccactttcaactgctgatcatgtagaa
acggataaaagcttaaagtcacacccacgtgaaaagaagctaattgatttcagggataag
ctatatcttgcccctttaacgacagttggtaacctgcctttcagaagggtttgcaaatcg
tttggtgtggatataacatgtggtgaaatggcaatgtgcacaaatcttatacagggccag
gctgcagaatgggcacttttaaggcgccatgtatctgaagatctgtttggagttcagata
tgtggggcatatcctgacactgttgctcgagctgctgaacttattgaacaagaatgttcg
gtcgattttattgatatcaatatgggctgtccaattgatcttgtcgttagtaaaggggca
ggttcagctcttctttcaaaaccaatgcggatgaaaaatctgatacacgcagtttctagc
acagtggacattccaataactataaaggcaagaacaagttactatgagggtagaagtcgc
attgactctgtgatagcagatgttgcgcaatggggagctagtgcagttaccattcatggt
agatctcgtcagcagcgttacaccaagcagcctgattgggaatatgtataccagtgtaca
agaaaggcccctgatactttacaagttcttgggaatggagacatcttttcattctcagac
tggaataaacacaaatccaattgcccagaactgtcatcatgcatgattgctcgaggtgct
ctagtaaagccctggctttttacagaaattaaagagcagagagattgggacataagttct
ggtgaacgcttgaatattttgaaagattatgtacgttttggacttgaacattggggttct
gacactaaaggagtggagacaactagatctttcttactagaatggcttagttatacatac
cgatatgttcctgttggtcttttggaagttctcccgcaaaggctgaactcacgcccacct
gcatattttggccgtgatgacttggagacattaatggcttctgagtctgctgtcgattgg
attaaaatatccgagatgttgcttggtaaggttccagttggattctcattttctccaaag
cacaaatccaacgcttttgacaaagctgagaacggatga

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