Erigeron canadensis (horseweed): 122586366
Help
Entry
122586366 CDS
T07610
Name
(RefSeq) probable CoA ligase CCL9
KO
K22133
oxalate---CoA ligase [EC:
6.2.1.8
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00630
Glyoxylate and dicarboxylate metabolism
ecad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
122586366
Enzymes [BR:
ecad01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.8 oxalate---CoA ligase
122586366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
GH3
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
122586366
NCBI-ProteinID:
XP_043614291
LinkDB
All DBs
Position
2:28582859..28586474
Genome browser
AA seq
521 aa
AA seq
DB search
METLTGLLKHIAVKFPDRRAVSVSGKFDITHSRLNELIDHAASSLVSAGVKPNDVVALTF
PNTIEYLIMFLAVIRVRATAAPLNQAYTVDEFEFYLSDSESKLLLTAKEGNEAAESAASK
IGIRHVTASLQDAASRVLLSTDSELTSSEPVENIVNDPSDVALFLHTSGTTSRPKGVPLT
QRNLYSSVNNIKSVYKLTEFDSTVIVLPLFHVHGLLAGLLSSLGAGAAVTLPAAGRFSAT
TFWLDMIKYNATWYTAVPTIHQIILDRHLAKPEPVYPKLRFIRSCSASLAPSILARLEEA
FGAPVLEAYAMTEATHLMCSNPLPEDGPHIPGSVGKPVGQEMAILDESGVEQKAGANGEV
CIRGPNVTSGYKNNPEANKAAFLFGWFHTGDIGFFDSDGYLHLVGRIKELINRGGEKISP
IEVDAVLLSHPDVAQAVCFGVPDEKYGEEINCAVIPREGSNLDEEEVSRFCKKNLAAFKV
PKKVFITDSVPKTATGKIQRRIVAEHFLTRISTAKVPKFGA
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggaaacattaaccggattacttaagcacatcgccgtcaaattccctgatcgccgcgcc
gtctccgtttccggcaaattcgatatcactcattctcgtctcaatgaactaatcgatcac
gccgcttcttcacttgtctctgccggtgtcaaaccaaacgacgtcgttgcactcaccttc
cctaacaccattgagtacttgatcatgtttttggcggttattcgtgtccgagcgacagcc
gcgccgcttaatcaagcatacacggtcgacgagtttgagttttatttatcggattccgag
tccaagcttttgctcacagcaaaagaaggaaacgaggcggccgagtcagccgcctcaaaa
atcggaatccgtcacgtcacggcgtcgttacaggacgccgcgtctcgcgttctcctttcc
acggattccgaacttacaagttctgaaccagtggaaaatatcgtgaacgatccgtctgac
gtggcgcttttcttacacacgtcagggaccaccagccgaccaaaaggcgtgcccctgact
caacgtaatttgtattcatcggttaataatattaaatcggtttacaaactcactgagttt
gactcgaccgttatagtccttcctttgtttcatgtccacggtttattagccgggttgctg
agttcgctcggtgcgggagcggctgtcacgctcccggctgccgggcgtttctccgcaacc
actttttggttagacatgattaaatataatgccacgtggtacaccgcggtaccaactatt
caccaaatcatactagaccgtcatttagccaaacccgaaccagtgtacccgaagctccgg
tttatccggagttgtagtgcatccctcgcgccgagcattttggctcggcttgaggaggcg
tttggcgctccagtcttggaagcgtatgccatgaccgaagctactcatttgatgtgttcc
aacccgttgcccgaagatggcccacacatccctgggtcggttgggaaacccgtgggtcaa
gaaatggcgattttggacgaaagtggtgtggagcaaaaggctggcgcaaatggtgaagtt
tgtattcggggccctaatgttacgagtgggtataagaataacccggaagcaaataaagcc
gcgtttttattcgggtggtttcatacgggtgacattgggttttttgactcagatggatac
ttgcatcttgttggccggattaaggagttgatcaaccgtggaggagagaaaatatcgcca
attgaggtcgatgctgtccttttgtcacacccagatgttgcccaagctgtttgctttggt
gtgcccgatgagaaatatggcgaagagataaactgtgctgtcatacccagagaaggatca
aaccttgatgaggaagaagtctcgagattctgcaagaagaatcttgctgcattcaaggtt
cctaagaaggtgttcatcacggattctgttccaaaaaccgcaacagggaagatccaaagg
aggattgtagcagaacacttccttactcgtatctccaccgctaaagtccccaagtttgga
gcttag
DBGET
integrated database retrieval system
