Erigeron canadensis (horseweed): 122586438
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Entry
122586438 CDS
T07610
Name
(RefSeq) ABC transporter G family member 35-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122586438
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecad02000
]
122586438
Transporters [BR:
ecad02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
122586438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_16
AAA_28
AAA_25
AAA
RsgA_GTPase
Rad17
DO-GTPase1
nSTAND3
DUF4296
Motif
Other DBs
NCBI-GeneID:
122586438
NCBI-ProteinID:
XP_043614363
LinkDB
All DBs
Position
2:45509158..45517523
Genome browser
AA seq
1466 aa
AA seq
DB search
MEEEKSEGNNNNNNNNNNIIRSISRSLSRAAEDLLSIGSSRSHHDRSSPHALADEEALRW
AALEKLPTYNRIRTTIFKSYDILTDHDLQTPSTDDKLFLDVRQLDSKAHQRFIDNIFKHA
EEDNGRFLRKFRDRIDKVGLSLPTVEVRYKNLTIEADCYIGDRALPSLLNATRNSIETLL
GCIGINLSKKTRLTILKHVSGIIKPSRMALLLGPPSSGKTTLLLALAGKLDSSLKVEGEI
TYNGHKLNEFVPRKTSAYISQHDVHAGEMTVKETLDFSARCQGTGSRLEMLEELARREKQ
LGIFPEAEVDLFMKGTAIEGDASSLITYYTLKLLGLDICRDTIVGDVMRQGISGGQKKRL
TTGEMLVGPAKTLFMDEISTGLDSSTTFQIVKCLQQVAHLTDSTILMSLLQPAPETFDLF
DDIILLSEGQIVYHGPRENVVEFFERCGFRCPERKGTSDFLQEVTSRKDQEQYWHNRREP
YRYIPVSEFVQLFKQFHVGERLENELSIPYDKDQSHKAALVFKKYLVSKRDLLKASWDKE
WLLIKRNSFIYIFKTVQFIILASTLMTVFFRTRMHTRNEQDGSMYNGAIVFSVLLNMFNG
LAEISLTVMRLPVIFKQRDLLFHPPWAYTFPTFLLRIPISLIETTAWMSIVYYGIGLAPQ
ASRFFKHFLLVFVVQNAGGAYFRVIAGVCRTMNIANTGGTLALFIIFLMGGFVLPRTQIP
SAWEWGYWISPLSYGYKAFSVNEFLAPRWMNKMSSNNVTRLGETILDSMDIPTEERWFWI
GTAALVGFIALFNILFTFALMFLDAPGKPQAIISKEAATEMENTNQNTRLEEIAPKKDTS
PRSDTCNVNAPKKGMILPFTPLAMSFDSMNYFVDMPHEMREQGVTENRLQLLCEVTGAFR
PGVLTALMGVSGAGKTTLLDVLAGRKTSGYVEGEIRISGFPKKQETFARISGYCEQTDIH
SACITVNESLIYSAFLRLPKEVRAQDKMIFVREVMELVELDDLANAIVGLSGVSGLSTEQ
RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIF
ESFDELLLLKRGGEVIYAGPLGRNSRHIIDYFEKIPGVPKIPEKYNPATWMLEVSSAAVE
SRLGINFAEHFKSSALYQRNKELVKELSTPPPGMTDLHFGTQYSQSSWGQFKSCIWKMWW
SYWRNPDYNLVRNIFTLTAALMIGITFRNIGEKRESSINVNTIIGALYSGVFFVGMNNCQ
TAQPVVAAERAVFYRERAAGMYSTLPYALSQVFVEIPYVFVQATYFSLIVYAMVSFEWTA
TKFIWFFFINFCSFLYFTYYGLMTVAVTPNDQVAAVLAVLFYGLFNFFSGFFIPRPRIPK
WWVWYYWICPIAWSVYGFIVSQYHDVEDTITVPGMSYNPAMNVYIKDHYGFKLDFMGPVA
TVLISFCVLFAFIYAFCLRTLNFQVR
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagagaaatcagaaggaaacaataataataataataataataataatattatc
agaagcatcagtagaagtttgagcagggcagctgaagatcttctgtccatcggcagtagt
cgcagccatcatgatcggagcagccctcacgccctcgcagacgaagaagccttacgatgg
gcggctttggagaagctgcccacttataaccgtatacgaaccaccatcttcaagtcttat
gatattctaactgatcatgacctccaaacaccatctactgatgataagttgttcttggat
gtccgacaactcgactcaaaagctcatcagcgcttcattgataacatctttaagcatgct
gaagaagataacggaagattcttgagaaagttcagagatcgcattgataaggttggcctg
tcccttccaacggtagaagttcgatacaaaaacttaacaatagaagcagattgctacatc
ggtgatagagccctcccgtcgcttctgaacgcgactcgaaattctatcgaaacacttctt
ggttgtattggaatcaacttatctaagaaaaccagactcactattcttaaacatgtatct
gggatcatcaaaccttccagaatggcactgctcttgggtccgccatcttctgggaagaca
actcttctgctagctttggcgggaaagctcgactccagcttaaaggtagaaggtgagatt
acttacaacggccacaagctaaatgagtttgtacctagaaaaacatcggcctatatcagc
cagcacgatgttcatgctggagaaatgacggtcaaggaaaccttagatttctcagcaaga
tgccaaggaactgggtcaagattagaaatgctggaagagctcgcaagacgagagaaacaa
cttgggattttccctgaagctgaagttgaccttttcatgaaggggactgccatagaagga
gatgccagcagtttgattacttactacactcttaagcttttgggcttggatatctgccgt
gacacaatagttggtgatgtaatgagacaaggaatctccggtggacaaaagaagcgatta
actacaggggagatgcttgttgggccagcaaaaactttgtttatggatgagatatctacg
ggtctagatagctccactacatttcaaatagtgaagtgcctgcaacaagttgcacacctc
actgactcaacaatcttgatgtccctgttgcaacctgccccggagacttttgatcttttt
gatgacatcatactactatcagagggtcaaatcgtgtatcatggaccacgagagaatgtg
gttgagttctttgagcgttgtggattcaggtgtcccgaaagaaaaggaacttctgacttc
ttgcaagaggttacatctcggaaggatcaagagcaatactggcataatagaagagaacca
tacagatatatcccagtttctgaattcgttcagctatttaagcaattccatgtgggcgaa
aggctagagaacgagctttcaatcccttatgacaaggaccaaagccacaaagcagctcta
gttttcaagaaatacttggtctccaaaagggacctgctcaaggcctcgtgggataaggaa
tggctattgataaagagaaacagtttcatttacattttcaagactgttcagttcatcatc
ttagcttccacactgatgacagtgttttttaggactagaatgcacacgaggaatgaacaa
gacggttcaatgtataatggagcaattgtattcagcgtactccttaacatgtttaacggt
ctagctgaaatttcccttacggtaatgaggcttcctgtaatcttcaagcaaagagacctt
ctgttccacccaccatgggcttacacttttccaaccttcctgcttcgtataccaataagt
ttgatagagactaccgcttggatgtctatagtatattatggtataggccttgcaccacaa
gcgagcagattcttcaagcacttcctgctggtttttgtagttcagaatgccggaggggca
tattttagggttatcgcaggagtatgtaggacaatgaacattgcaaacacaggtggaacc
cttgcgcttttcatcatatttcttatgggcggtttcgttctaccacgaactcaaattcct
agtgcgtgggagtggggttattggatatcaccattgtcatatggctataaagccttctca
gtaaatgagtttttggcgcctaggtggatgaacaaaatgagttcaaataatgtaactaga
ttgggcgaaacaatattagatagcatggatattccaaccgaagaaagatggttctggatt
ggtactgcagctcttgtaggttttatcgctcttttcaacatccttttcactttcgctctc
atgtttttagacgcccctgggaaaccacaagcaatcatctccaaagaagcagccacagag
atggaaaatactaaccaaaacacaagactcgaagaaattgcacctaaaaaagatacaagt
cctcggtcagacacttgtaatgttaacgctcctaagaagggaatgattcttccgtttact
ccactcgccatgtcatttgacagcatgaattattttgttgatatgccccacgaaatgcga
gaacaaggagtgacagaaaataggttgcagttactttgtgaagtgaccggtgctttcagg
cctggagtcctgactgcattgatgggagtaagtggagctggtaaaacgacactgttggat
gttttagcagggcgaaaaactagtggttatgttgaaggggaaattaggatatcaggattc
ccgaaaaaacaagaaacttttgcaagaatttcagggtactgtgagcaaactgatattcac
tctgcttgtatcacggtcaatgagtctttgatttactcggctttccttcgcctcccaaaa
gaagtccgagctcaagataaaatgatttttgtacgtgaagtaatggagcttgttgagcta
gacgacctagcaaatgcaatagtaggactttcaggagttagtggcttgtcaacagaacaa
agaaagaggctaacaattgctgtggaacttgttgcaaatccatccatcattttcatggat
gaaccgacttctgggcttgatgccagagcagcagccattgtcatgaggaccgtaagaaac
actgttgacacagggagaacagttgtttgcaccatccatcaacccagcattgatatcttt
gaatcctttgatgagttattgctgctgaaaagaggcggagaagtgatctatgcagggcca
ctcggaaggaattctagacacattattgactattttgagaaaattcctggggttccaaag
attccagaaaagtacaatccagcaacatggatgttggaagtcagttcagctgctgtagag
agccgacttggtatcaattttgctgagcacttcaaatcatcagcactatatcaaagaaac
aaggagttagtaaaggaattaagcacaccgcctccggggatgacagatcttcattttgga
acacaatattctcaatcttcatggggacaattcaagtcttgtatatggaagatgtggtgg
agttattggagaaatcctgattataaccttgtccgcaacatcttcacgttgactgcagca
ctcatgattgggataacatttcgaaatattggagaaaaaagggagagtagcatcaatgtg
aatacaatcattggagctttatattctggagtattctttgttggtatgaacaactgccag
acggcgcaacctgtggtcgctgcagagagagctgtattctatcgagaaagagccgctgga
atgtactcaacattaccctatgccttgtcacaggtgtttgtagaaataccatatgtattt
gttcaagctacatattttagtctgatagtgtacgccatggtgtcattcgaatggacagca
accaaatttatctggttctttttcatcaacttctgttcattcctctatttcacctattac
ggattgatgactgtcgccgtcacaccaaacgatcaagtagcagccgtgctagctgttctc
ttctacggactcttcaatttcttttcgggctttttcatccctagacctagaattccaaag
tggtgggtatggtactactggatatgcccaatagcctggagtgtttacgggttcattgtt
tcgcaataccatgatgttgaggacacaatcacggttcctgggatgtcatataacccggct
atgaatgtttatatcaaagatcattatggttttaaattagatttcatgggtccagttgcc
acggtgctaattagtttttgtgtattatttgctttcatttatgccttctgcttaagaact
ctaaatttccaagtcagatga
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