Erigeron canadensis (horseweed): 122586443
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Entry
122586443 CDS
T07610
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 7
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122586443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122586443
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122586443
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
122586443
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
122586443
NCBI-ProteinID:
XP_043614366
LinkDB
All DBs
Position
2:complement(36034642..36040245)
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AA seq
375 aa
AA seq
DB search
MARFSIGDEDEDAPLTYKRARCSEPPSQSNRVIDTAEVDNDDDEDFAVTFDAHELTTVDD
VESDSGDEELEEVDEDGSDGDEEEEEEDEDDDDENDDDVDEVPPVSTARQINCLPPVSRP
VTETVFNNTNGALQVVLTDPDVLDCPICLDPLSAPVFQCENGHIACSLCCSKINRKCPSC
CMPIGYNRCRAIEKVIESVRISCKNAQYGCKENMTYSKKNEHEIICPHAPCFCPHPSCPF
TGSSKNLYLHFRVKHAASTTRFTYNTTFTLRVESNQKHVFLQEQHESVIFILNHEVREQG
RAFNVDCVGPSTLKTSLEYHLTTKNDEATLSLQCAPQIYAKWSEHKPAKNYIIVPSDFSH
CNGVLSLDVCIRKTL
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggcgagattctcaataggcgacgaagacgaagatgctccactcacctataaacgtgca
cgttgctcggaacctccgtctcaatctaaccgtgttattgatacggcagaagtcgataac
gacgacgatgaagattttgcagttacctttgacgctcacgaattgactacggttgatgac
gtggaatccgattcgggagatgaagaacttgaagaagtggatgaagatggatctgatggt
gatgaagaagaagaagaagaagatgaagatgatgatgatgaaaatgatgatgacgtggat
gaggttccgcctgtatcaaccgctagacagattaattgccttccgcctgtttcgagaccg
gtgacggaaacggtgtttaataatacgaatggagcgttgcaggttgtattgaccgatcct
gatgttctcgattgtccgatttgtctcgatccgttatccgctccggtttttcagtgtgag
aacggccacatagcgtgctctttgtgctgctccaaaataaatagaaaatgtccttcttgc
tgcatgcctattggttataaccgttgccgagctattgaaaaagtcatagaatcagtcaga
atatcatgcaaaaatgctcaatatggttgcaaagagaatatgacttacagtaagaaaaac
gagcatgaaataatttgtccgcacgctccatgcttttgccctcacccgtcatgtcccttt
actggttcttccaaaaatctctacctacacttccgtgttaaacatgcagcctctaccacc
cgtttcacctacaacaccactttcactcttcgtgtagaatctaatcaaaaacacgttttt
cttcaagaacaacatgaaagtgtcatctttattctcaatcacgaagttcgtgaacaagga
cgagcttttaatgttgattgtgtgggtccaagcacattaaaaacttctttggagtatcac
ctgactactaaaaacgatgaggcaactctgtcattgcaatgtgctccacaaatatatgca
aagtggtctgaacataagcccgcaaagaattatataattgtcccgtctgacttttcacat
tgcaatggggttctgtctctcgatgtctgcataaggaaaaccctgtaa
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