Erigeron canadensis (horseweed): 122586788
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Entry
122586788 CDS
T07610
Name
(RefSeq) general transcription factor 3C polypeptide 3 isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecad03021
]
122586788
Transcription machinery [BR:
ecad03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
122586788
TFIIIC, fungi type
122586788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_14
TPR_2
TPR_9
TPR_16
TPR_1
TPR_8
TPR_CcmH_CycH
TPR_12
TPR_11
TPR_17
DUF7017
ANAPC3
ARM_TT21_N
TPR_10
ARM_TT21_5th
TPR_15
NatA_aux_su
UPRTase
DUF3097_C
Motif
Other DBs
NCBI-GeneID:
122586788
NCBI-ProteinID:
XP_043614709
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All DBs
Position
2:complement(38096708..38104739)
Genome browser
AA seq
945 aa
AA seq
DB search
MEREEGIRDDGLGTGDSDSKQKEVGESVSGLNENGNEHMGCSQENQAEDSNAEEEYDDDE
EEEEEDAEAEEPYTLTFEGEINPLDFTEVDANGVQPYQHLERMEYEALAAKKRLADLEYE
RQGMPPQKKSRKEDFYEATFQELVDEMTNAKKRKSKKIGKRGRKKGSKRKVSPEITRKLG
DATLFYAHGQYEKAIPLLKDIILRSPNLPEPYHTLGLIYKLQGDKKRALGFYMLAVHLTP
KDASLWKLLVTWSMEEGNRGQARYCLDRAIKADPEDIGLRYHRATLFVELGEHQRAAESY
HQIWQLRPQNLEALKTAATLYQKCGRNERSVNILEDYLKKNPKDVDLSVILLLASVLMSG
NAYAKALHHIEYAQQTYSADKELPAEFLIKAGICHVHLGNMEKAEAFFRVFRHGNANDCT
HLVIEVANTLMSAKHHESALKYYLMLEGRDSCNKGLLYLNIGRCYSFVDARTQAIAYFYK
ALNDHEHDIDVRLELVSLLLVENKEDEAICVLSPPDSESIVNQTSDKGKPWWTDGKIKLK
LSYIYKSKGLTEAFVEAIYSLVRETLLLETFQPKGRKKKRLTKSELLKRVQVLDEYQDHN
VFQGYRPVASSYDLSKAARAKKLLQKHETKREEKRARALAAGDVLQSDDSDGESPAYREP
PLPNLLKDEEHLTLIVDLCRDLVSMQRYWDALEIINPSLKLAQNTLTIEKQEELRSLGAQ
IAYNIDGPANGRECARHIVSQNPYSFAAWNCYYKIISRCRLDNFSKFLREMIVKHEDCVP
PILIKGHQFTMKSQHQAAARYYLKAYKLMPENALINLCAGTALINLALGLRLHNRHQCVL
QGLAFLYNNLRLSGNSQEALYNLARAYQHVGLISIAATYYEKVLAVHQKDHPIPKLPNDG
PEITNDLKPGYCDLRREAAYNLHLIYKESKSMDLARQVLKDHCSV
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggagcgagaagaaggaataagagatgatggattgggtacgggtgattctgacagcaaa
cagaaagaggtcggtgaatcggtttctgggttaaatgagaacggaaatgaacacatgggg
tgcagtcaagaaaatcaagcggaagacagtaatgctgaagaagaatatgacgacgatgaa
gaagaagaagaggaagacgcagaagcagaagaaccttataccctaacatttgaaggagag
ataaatccattggatttcactgaggttgatgctaatggtgttcaaccttatcaacatttg
gaacgtatggagtatgaagctttggctgctaaaaagcgtttagcagacctcgagtacgag
cgtcaaggaatgccaccacaaaagaagtcgagaaaagaggatttttatgaagcaaccttt
caggaattagtagatgaaatgaccaatgcaaagaaaagaaagtcaaagaagattgggaaa
agaggtaggaagaagggatctaagaggaaagttagtccggagataacacgcaaattaggt
gatgctacactcttttatgcacatggacaatatgaaaaggccatacctctgttgaaagat
atcattctgaggtcaccaaacctgcctgaaccttatcatacacttggtcttatatataag
ttgcaaggggataaaaagagagccttggggttttatatgcttgctgtacatttaacgcca
aaggatgcatctctctggaagttacttgttacttggtctatggaagaaggaaatcgtgga
caagctcgttattgtcttgaccgagcaataaaagcagatcctgaagatattggccttaga
tatcaccgtgccacactttttgttgagcttggagaacatcaaagggcagctgaatcatat
caccaaatctggcaactccgtcctcagaatcttgaagcactcaagacagctgcaacactg
taccaaaaatgtggtcggaatgaacgtagtgtcaacattcttgaagactatttgaaaaag
aatccaaaagatgttgatcttagtgtgattcttttattggcttcagtgcttatgtcggga
aatgcttatgcaaaagctcttcaccatattgagtatgcacaacaaacttattccgctgat
aaagagttaccagctgagtttttgataaaagcaggaatatgccatgttcatcttggaaac
atggaaaaagccgaggctttcttccgcgtgttcagacacgggaatgcaaatgattgcact
cacttggttattgaagttgcaaacacgttaatgagtgctaagcatcatgaatctgcgttg
aagtactacctgatgttagaaggaagggacagttgcaacaaaggcctactatatttgaat
atcgggcgatgttattctttcgtagatgcaagaacacaagcaattgcctacttctataaa
gctttgaatgaccatgagcacgatattgatgtgaggttggaactggtgtcacttctctta
gtagaaaataaagaagatgaagccatttgtgtactttctcctcccgattcagaatcaata
gttaaccaaacatctgataaggggaaaccgtggtggactgatggaaaaataaagttaaag
ctatcttacatttataaatccaaaggtttgaccgaggcctttgtagaggcaatatattca
ttggttcgtgaaacgttgcttcttgaaactttccagccgaagggtagaaaaaagaaaagg
ctaacaaaaagcgagcttctaaaaagagttcaagtactagatgaatatcaagatcacaac
gtatttcaaggataccgtcctgttgcttcgtcttatgatctatcaaaagctgcacgagca
aagaagttgctccagaaacacgaaacaaaaagagaggaaaaacgggctagagcgctagct
gctggagatgtgttgcagagtgacgattcagatggcgaatctcctgcatatagagaacct
cccctgccaaatctcttaaaggatgaggagcatcttacgctcattgtagatttgtgcaga
gacttggtatctatgcaaagatattgggacgctctggaaatcatcaacccgagtctgaaa
ttagcacaaaacactctaacaatagagaagcaagaggagcttcgatcacttggagcacag
atagcatataatattgatggtcctgcgaatggacgggaatgtgcgcgacacattgttagc
caaaatccttacagctttgcagcatggaattgctactataaaatcatatcaagatgcagg
ctggataattttagcaaattcttgcgtgagatgattgtaaagcatgaagattgtgtacca
ccaattttaattaagggacatcagtttaccatgaagagccagcatcaagccgctgcaaga
tattacttgaaagcatataaattgatgcctgagaatgcgttgatcaatctttgtgctgga
acggccctaatcaacctagcccttggattaagacttcataacaggcatcagtgtgttttg
caaggtttagcttttctctacaacaatcttcgcctttcagggaacagccaggaagcttta
tacaacctagcacgagcttatcagcatgttggtctaatatcgattgcggctacgtactat
gaaaaggtgcttgcggttcatcaaaaagatcaccctatcccaaagctaccgaatgatggt
ccagaaatcacaaatgatctcaagcctggttattgtgatcttagaagagaggcggcttac
aatttgcacctaatttataaagaaagcaaatctatggatcttgccaggcaggtgcttaaa
gaccattgtagtgtttaa
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