Erigeron canadensis (horseweed): 122586798
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Entry
122586798 CDS
T07610
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC122586798
KO
K14315
nucleoporin NDC1
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122586798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122586798
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122586798
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
122586798
NCBI-ProteinID:
XP_043614723
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Position
1:21020587..21026719
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AA seq
414 aa
AA seq
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MGVCSWLGYGLHFVFTRKWVLDFPIVQRPLFFSYKMGVRKAMIRGIRLSSAGYLVSLVLS
FFISEDKDQLVVGGLVXEQIVFYLASCVVFLCWELNRHLLQVFLTKRYVFAPPKGSAAAE
TNPSDHLLAALEETSPRSFMRHLAYLDLCMVSESNVDSWRRAAFFEETGETYKKVIAACL
KPLERLTLDLSEGPGTSSEKSFQLSSQLRSSTASGLHEPLMIFRILDSLETYKVDPIAGC
WRFGGLELTNSTLQVCAWCARIASSLTIRSHKEDRFGVAQLFGCNAATISTLLSCLLAVE
CLMGKKTNIQSSNQYLTGPATIKWAALSPARRETVTNGIATNKKEGPHYSKAYSMADILR
TSIYQIVSSFEYEMVTSYKGGLLEKDWIANGRPLYGSRELLVQKLKMFLELHAN
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgggggtttgttcttggcttggttatgggttgcattttgtgtttacaagaaaatgggtt
ttggatttccccattgttcagcgtcctcttttcttcagctacaaaatgggtgttcgcaag
gcaatgattagaggcattaggctttcaagtgctgggtacctagtctcattagtgctgtcg
tttttcattagtgaggacaaggatcaactggtagtgggaggtcttgtcngcgagcagatt
gtcttctatttggcatcctgcgtggtgtttctctgttgggagctaaatcgccatttgctg
caggtttttcttacaaagagatatgtatttgctccgccaaagggatcagcagcagcagaa
acaaacccaagtgatcatcttctagcagcccttgaagaaacaagtccaagatcatttatg
cgtcatcttgcttatcttgatctctgcatggtgagtgagagtaatgttgatagctggcgc
cgagctgccttttttgaagaaactggcgagacctacaaaaaagtgatagctgcatgcctg
aagcctctggaacggctcaccttagatttgagtgaagggccgggaacatcctctgagaaa
tcattccaattgtctagtcagttacgttcatcaactgcttcaggactccatgaaccatta
atgattttcaggattctggattctttagaaacttacaaagttgatcctatagcggggtgc
tggagatttggaggcttggagctgactaattcgactctgcaggtatgtgcatggtgtgct
cggattgcatcttcactgactatacgttctcacaaagaagatcgttttggggttgctcaa
ctctttggttgcaacgctgctacaatatccacccttttgtcctgcttattagctgttgaa
tgtttaatggggaaaaagaccaatatccagtcatcaaaccaatatttaaccgggcctgca
accatcaaatgggctgcactgagtcctgcaaggagagaaacagtgacaaatggtattgct
acaaataaaaaagagggacctcactactcaaaagcctattccatggctgacattctcagg
acttcaatctaccaaattgtttcaagtttcgaatatgaaatggttactagttataaaggt
ggattgcttgagaaggattggatcgctaatggtaggcctctttatggaagtcgtgagctt
cttgtacagaaactgaaaatgtttcttgaacttcatgctaactag
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