Erigeron canadensis (horseweed): 122586847
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Entry
122586847 CDS
T07610
Name
(RefSeq) long chain acyl-CoA synthetase 9, chloroplastic isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00061
Fatty acid biosynthesis
ecad00071
Fatty acid degradation
ecad01100
Metabolic pathways
ecad01212
Fatty acid metabolism
ecad04146
Peroxisome
Module
ecad_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
122586847
00071 Fatty acid degradation
122586847
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122586847
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ecad01004
]
122586847
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecad04147
]
122586847
Enzymes [BR:
ecad01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
122586847
Lipid biosynthesis proteins [BR:
ecad01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
122586847
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of breast milk
122586847
Exosomal proteins of breast cancer cells
122586847
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
122586847
NCBI-ProteinID:
XP_043614781
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Position
2:37318680..37326180
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AA seq
718 aa
AA seq
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MIDWGHSIVYITKVLFWDYKSNLDMSAYIVGVLAPLLLTLALRNSKSNEKKRGLLADVSG
EPGYAIRNHRFTSPVETAWVGIKTLAALFENACNQHGNKNLLGTRIVISREMEVNQDGRS
FEKLHLGDYEWKSYGQVFQAVCNVASGLVQAGHKTGERVAIFADTREEWFIALQACFRRN
VTVVTMYASLGEEAICHSLNETEVTTVICGNKELKKLIDVSGQIDTVERVICMDDDSLLT
EGSTSWKIFSFSEVERLGSENPVEADLPLPADVAVIMYTSGSTGLPKGVMMTHSNVLATV
SAVMTIVPALGVNDVYLAYLPLAHILELAGENLIAAVGSSIGYGSPLTLTDTSSKIKRGT
KGDASILRPTLMPCVPAILDRVRDGVRKKVDAAGGLSKALFNLAYNRRLSAINGSWFGAW
GLEKLLWSFLVFRKIRAILGGRMRFILSGGAPLSADTQRFINICLGTPIGQGYGLTETCA
GGTFSEYDDTSVGRVGAPVPCSYIKLIDWPEGGYLTTDSPMPRGEIVIGGPNVTLGYFKN
DEKTKEVYKVDERGLRWFYTGDVGQFHKDGCLEIVDRKKDIVKLQHGEYVSLGKVEAALS
VCPYVDNIMVYANSFHSYCVALVVATQSAVECWALQKGIEFKDLASLCEMEDTVKEVYSS
LLKVAKTSRLQRFEIPAKIKLLSEPWTPESGLVTAALKLKRDVVRKTFSDDLANFYLS
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgattgattggggtcactccattgtgtatattactaaggtgctcttctgggattataag
agcaacttggacatgagtgcttacattgttggggtcttggctccacttttactcactctt
gcccttcgaaactctaaatcaaacgaaaagaagcgaggtctacttgctgatgttagtggg
gaaccggggtatgcaatcagaaaccatcggtttacatctccagttgaaacagcatgggta
ggaatcaaaactcttgcagctctttttgagaatgcatgcaatcagcatggtaacaaaaat
ctacttggaacgcggatagtgatttcaagagagatggaagtaaaccaagatggaaggtca
tttgaaaagcttcatttaggtgattatgagtggaaaagctatggtcaggtgtttcaagct
gtttgtaatgttgcatcaggcttggtccaagctgggcataaaacaggagaacgtgttgca
atctttgcggatacacgtgaagaatggtttattgcgctgcaggcttgttttaggcgaaat
gtcactgttgtgaccatgtatgcgtcgttgggagaagaagccatttgccactcattaaac
gagacagaggttactactgtaatttgtggaaacaaagagctgaagaagcttatagatgta
agtggacaaatagatacagttgaacgtgtaatatgcatggatgacgattccttattgacc
gagggaagcaccagctggaaaatcttttcattttctgaagtagaacgacttggcagtgag
aaccctgttgaggcagatctaccgctcccagctgatgtggcagtgattatgtatacaagt
gggagtacgggtttgcctaagggtgtaatgatgacacacagcaatgttttagcgacagtt
tctgctgtcatgacaattgtgcctgcccttggagtcaacgatgtctatttagcatactta
ccactggcacatattcttgaacttgcaggcgagaatctgattgcagctgtaggaagttct
ataggttatggatccccattaactcttacagatacatcaagcaaaattaagaggggtaca
aagggggatgcgtctattctaaggccaactttaatgccgtgtgttccagctattcttgat
cgtgtccgagatggtgtacggaaaaaggtggatgcagcaggtggactatcaaaggcttta
tttaatttagcctataatcgcagattgtctgctataaatggcagttggtttggggcatgg
ggcttagaaaagcttttatggagctttctagtatttagaaagatccgggctattttaggg
ggtcgtatgcgcttcattttgtctgggggtgccccactgtctgcagatactcaaagattc
atcaacatttgtctgggtactccaataggtcaaggttatggtcttactgagacgtgtgct
ggtgggacattttctgagtatgatgatacatctgttggtcgtgttggtgcacccgttcct
tgctcctatatcaagttaatagattggcctgaaggtggttacttaaccactgattcacct
atgcctcgtggagaaatagtgattggtgggccaaatgttactctaggatactttaaaaat
gacgagaagacaaaagaagtatacaaggttgatgagagggggttgaggtggttctacacg
ggtgatgttgggcagttccataaagatggctgtcttgagatagtcgaccgtaaaaaggac
attgttaaacttcaacatggagaatatgtttctctaggaaaggttgaggcagctctaagt
gtttgcccttatgttgataacatcatggtgtatgccaattcattccatagttattgcgtc
gcccttgtggtcgctacacagtctgcagtggaatgttgggctttgcagaaaggtatcgag
ttcaaggaccttgcaagtttgtgtgaaatggaagatacagtgaaggaagtttatagttcc
ctgctaaaggttgcaaaaacatcacgattgcagaggtttgagattcctgcgaaaatcaag
ctgctttcggaaccatggacccctgaatccggactagtaactgcagcactaaagcttaag
agagacgttgtcagaaagacattttcagatgatcttgctaatttctacctatcttga
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