Erigeron canadensis (horseweed): 122586851
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Entry
122586851 CDS
T07610
Name
(RefSeq) truncated transcription factor CAULIFLOWER A-like isoform X1
KO
K09264
MADS-box transcription factor, plant
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecad03000
]
122586851
Transcription factors [BR:
ecad03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
122586851
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
K-box
SRF-TF
TPR_MLP1_2
FliD_C
Striatin
Het-C
A_amylase_dom_C
Exonuc_VII_L
PRA-CH
DUF3584
Motif
Other DBs
NCBI-GeneID:
122586851
NCBI-ProteinID:
XP_043614786
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All DBs
Position
2:complement(40835452..40856666)
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AA seq
238 aa
AA seq
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MGRGRVTLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDADVALIVFSTKGKLCEYATD
SSNRMERIIERYERYSDAKMQLNSTNESQGNWSLEHAKLKSRIEQLQKTQRHFIGEELDS
LNLKELQSLEQQLDSALKNIRSKKNQVMLETISQLQKKDKDLQDQNNLLSKQIKEQEKEV
ARHELEMQNHGIVPSFQLNSLNNCDSYMAGGDGEIEENPRQGQPSTVMPPWMIQYMNQ
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaggaagagtgacgttgaaaaggatagaaaacaaaataaacaggcaggtgact
ttttcaaaacggcggtcaggtctgctcaaaaaagctcatgagatctctgttctttgtgat
gctgacgtggctctcatcgtcttctctactaaaggcaagctctgcgaatatgctactgat
tcctccaacagaatggaaaggatcattgagaggtacgaaaggtattcggatgcaaagatg
caacttaattcgactaatgaatcacagggaaactggtctctggagcatgccaagctcaaa
agtagaattgagcaattgcagaaaacccaaaggcatttcataggagaagaacttgattcc
ttgaacctcaaagagcttcaaagtttggagcagcaacttgattcagctctcaaaaacatt
aggtcaaaaaagaatcaagtcatgcttgaaaccatttctcagctccaaaagaaggacaaa
gatttgcaggatcaaaacaacttgctttctaagcagatcaaggaacaagagaaagaagta
gcacgccatgagttagagatgcagaaccatggtatcgtgccctcatttcagttaaatagc
ttgaacaactgtgactcatacatggcaggaggcgatggggaaatagaagaaaacccaaga
caaggtcaaccatctactgtcatgcccccctggatgattcaatacatgaaccagtaa
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