KEGG   Erigeron canadensis (horseweed): 122586870
Entry
122586870         CDS       T07610                                 
Name
(RefSeq) snurportin-1
  KO
K13151  snurportin-1
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122586870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ecad03041]
    122586870
Spliceosome [BR:ecad03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    122586870
SSDB
Motif
Pfam: SPN1_m3Gcap_bd mRNA_cap_enzyme Trypan_PARP
Other DBs
NCBI-GeneID: 122586870
NCBI-ProteinID: XP_043614818
LinkDB
Position
2:43078921..43082504
AA seq 426 aa
MAPHEIRRPFKRAAISDQQKRRELSLQRQAENRTHAQLQARRLASSILSFPNHQSEPESV
PEPESHPEPIVEEPESDVRDVTDMDIRQAAKLKGYEARRWYASQLMLPEWMIDVPDRLNH
DWYVFARPSGKRCFVVSSNGTTVSRLRNGSQLHRFPSSLPNGAKTKEGSRSAHSYCILDC
IFHELDQTYYVIDMVCWAGISFYECTAEFRFFWMNSKLIESGACEEPSTYHRYRFSLLSV
DNCDQEGLQTAYTGSVPYVKDGLLFYNKHAHYQTGNTPLALVWKDQMCSQYVIDTDNKGQ
VPNQQQVVLELQDNGQLVTSDDPPVVLGCLNATFIQETGLNSGNLLRFAVNEGGLTFVDG
KLEKANLQYVGKVHRARAFADSYSKIVFQYMVRHSPLQIEHLFASMGTSNEQDSSTDELE
MDGLMI
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggcgccacatgagatacgacgtccgttcaaacgggcagcaatctccgaccaacaaaaa
cgccgcgaactttctttacaacgccaagccgaaaaccgaacccatgctcaactccaagcc
cgccgtctcgcttcttccatcctatccttcccgaaccaccaatccgaacctgaatcagtc
cctgaacccgaatcacaccctgaacctatagtcgaagaacccgaatcggatgtccgagat
gttaccgatatggatatccgtcaagcggctaaactcaaaggctatgaagctcgccggtgg
tacgctagtcaactcatgctccctgaatggatgattgatgttcctgatcgccttaatcat
gactggtatgtgtttgcaaggccatctggaaaacgatgttttgttgtttcctcaaatggc
acgactgtcagcagactacgcaatggttcccaattgcatcgttttccatcttctttacct
aacggtgcaaaaactaaagaaggttcccggtctgctcattcttattgtatacttgattgc
atctttcacgagttggatcaaacgtattatgttatagacatggtgtgctgggcagggatc
tcattttatgaatgcactgccgagtttagatttttctggatgaacagcaagctcattgag
tcaggggcttgtgaggagccatctacctaccatagatacagatttagtctcttgtctgtt
gataattgtgatcaagagggactccaaacagcttatacagggtcggtaccgtatgtgaaa
gatgggctgttgttttataacaagcatgcacattatcaaacaggaaatacaccattggct
cttgtctggaaggatcagatgtgtagtcagtatgtcattgatacggataacaaaggacag
gttccaaatcaacaacaggtggttttggagctacaagataatggacaactggttacctct
gatgatcctcctgttgtacttggatgcttgaatgcaactttcatacaagagacagggttg
aattcaggaaacctcctacgttttgctgttaatgagggtgggttaacatttgtggatggg
aagctggagaaggctaatctacagtatgtaggaaaggtccaccgtgcacgtgcttttgca
gatagttactctaagattgtattccaatatatggttcgccattctcctctacaaatagaa
catctgtttgcatctatgggtacatcaaatgaacaagatagcagcacggatgagttggaa
atggatggtttgatgatctga

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