Erigeron canadensis (horseweed): 122586929
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Entry
122586929 CDS
T07610
Name
(RefSeq) lysine-specific histone demethylase 1 homolog 3
Organism
ecad
Erigeron canadensis (horseweed)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
SWIRM
Pyr_redox_2
DAO
HI0933_like
FAD_oxidored
Thi4
FAD_binding_2
FAD_binding_3
Pyr_redox_3
Pyr_redox
NAD_binding_9
Lycopene_cycl
GIDA
NAD_binding_7
AlaDh_PNT_C
Trp_halogenase
MurD-like_N
YjeF_N
Med26
Motif
Other DBs
NCBI-GeneID:
122586929
NCBI-ProteinID:
XP_043614893
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All DBs
Position
2:complement(40290296..40298831)
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AA seq
1780 aa
AA seq
DB search
MECGGNESGSNKGMLEIGIGNEIGLDKEIGLDKEIRLGFDVNCGGSGKEIRVEKMDVEKV
GKKKRSVEVKNGIGSEDEDEPIGSMFKVKSRRNPKKVKVERDGGVVDKVKKVEVVGGEDR
DFGGMDDTLAFFKKKLKGPKKDSGFSTIKGSDLDVNVKMDCDVKLTMATKGKSVCEDGVV
ENVKKGLKSSGKEKVKRSRIKTLKKAALGENVMQNVKEGSLEKKKRPKSKSAKKEALGGN
LGQNDRVGTSDDHLEDSLSAFLLKAQSGSQKSRKTVKQKQVQTTPACIDGMDKTFNNDPV
HKACTVPSLTVKIEENEKLADGTIKDSTEYNVEEDELKVSTSAIAKSVHDFSEVDVQGTK
VEASCSDHENRPTVGFIISPKLDTDQKISPSLLANNEDMNQSSYPVGEVILEQDQNGSLS
PQPSDCDHEFISVSSQKENASASNGRLSPVLLTECDKYENGDQHEASSSDSGSMSDHETK
SDKKSAGKRIIRQAKRHRQEDMAYEGDADWETLIYEQHLFANHQDGDKYQPTKTKGKLDF
LQTISLEAENGGVAAVSVGLKARAAGPVEKMKFKELLKRKGGLQEYIECRNHILHLWNKD
VTRILPLSEFKISDTAIENEHPQASLIRDIYLFLDHYGYINSGVASIKEMSNGGVKPNFR
LSGEENDGRKSGAPVTDLDDGVSFILGRAKSCDVLISENDAATEHPDVIVHKDEGVHVPD
PPGKCLEMICHSENLPESSGTRVANSAGQKEPTVCLQCDDSETRKKIIIIGGGPAGLTAA
RHLQRQGFHVTVLEGRDRIGGRVYTDTSSLSVPVDLGASIITGVEADVTSQRRPDPSSLV
CAQLGLELTVLNSDCPLYDTVTGHKVPSDVDEALEAEYNSLLDDMQLVVAQKGDRAMKMS
LEEGLKCGLKVRRGRSDKTSAGEILNPLERRVMDWHFAHLEYGCAASLQEVSLPCWNQDD
IYGGFGGAHCMIKGGYGAIVDSLKDGLHIHLNHMVTDICYESQKKVKVSTANSKEFTGDA
VLITVPLGCLKAETIKFYPPLPEWKYSSIQRLGFGVLNKVVLEFPEVFWDDSVDYFGATA
EETDQRGWCFMFWNVRKTVNAPVLIALVVGKAAINGQNLTSSDHVNHALVVLRKLFGNSA
VRDPVASVVTDWGRDPFSYGAYSYVAVGASGEDYDTLGRPINNCLFFAGEATCKEHPDTV
GGAMISGMREAVRIVDILTTGNDFTAEVEAIVAAKRHSDSERSEVRDIIRRLDAIELTNV
HKNSLLQNMFFSAKSRSGRLHLAKELLNLPSDVLRSFAGSKEGLGVLNSWMLDSMGKNGT
QLLRQCVRLLVRVSTDLLAVRLSGIGKTVKEKVCVHTSRDIRAIASQLVSVWVEIFRKEK
ASNGGLKLLRQSSAVDASKSRSHAASGKPPLRAHLTSSENRAMKGVSVSSYNRKGNAAAV
TKAENRPSSSQGSAGRQNCQEEDYIDLPMSEEEQAAFDAAEAARAAALAAAEAYASSGAK
SSTPFQLPKIPSFNKFARREQYAQMDESEYRKKWAGGVTGRQECISEIDSRNCRVRDWSV
EFSAAGVNLESSKITGDNRSQRSHSNENAGPVHYREHSGESAGIDSSIFTKAWVDSAGSE
GLKDHSAIDRWQTQAAAADSDFFNRTNYLMDEEDSNMSLKPSINRHDGLANESSASQVTV
NRELMGNQPRGVDKIKKSVVDYVASLLMPLYKARKIDKESYKSIMKKTATKVMEQTTDAE
KLMAVFEFLDFKRKNKIRAFVDRLIERHMAMKTDAKSGCS
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atggaatgtggtggtaatgaaagtggatcaaataaggggatgttagaaattgggataggt
aacgaaatcgggctagataaggaaattgggctagataaggaaatcaggttagggtttgat
gtgaattgcggtggtagtgggaaggaaattagggttgagaaaatggatgtggagaaagta
gggaaaaagaaaagatcggttgaagtgaaaaatgggattggttcggaagatgaggatgag
ccgattggatcgatgtttaaggtgaaaagtagacggaatcctaagaaggtgaaggtggaa
agggatggaggtgttgtagataaggttaagaaggtggaagttgttggtggtgaagatcgg
gattttggtggtatggatgatacattggctttttttaagaagaagttgaagggaccgaag
aaggattctggttttagtacaattaaagggagtgatttggatgtcaatgtgaagatggat
tgtgatgttaagttgacgatggcgacaaaaggaaagagtgtttgtgaagatggagttgtt
gagaatgtgaagaaagggttgaaaagtagcggtaaagagaaagtcaagagatctagaatt
aagacattgaagaaggcggctttgggtgaaaatgtgatgcagaacgttaaagagggtagt
ttagaaaaaaagaagaggcccaaaagtaagtcggctaagaaggaggctttgggtgggaat
ttgggacaaaatgatagagtgggtacttcggacgaccatttagaagattcattatctgct
tttcttctcaaggcacaatctggttcgcagaaatctcggaaaaccgtcaaacagaagcag
gttcagacaactccagcttgtattgatggaatggataaaacatttaataatgatccagtg
cacaaagcgtgcactgttccatctttaacggttaagattgaagaaaatgaaaaattagca
gacggaactattaaagattcaactgaatataatgttgaagaggatgagttgaaagtttca
acttctgcaatagcaaaatcggtccatgatttttctgaggttgatgttcagggaacaaag
gtggaagcttcatgctctgaccatgagaacaggccaactgtcgggttcataattagccct
aagttagacacagaccaaaagatttctccaagcttgctagccaacaacgaagatatgaac
cagagctcataccctgttggtgaggtcatcttggaacaggatcaaaatggctcccttagt
cctcaacccagtgattgtgaccatgaatttatttcagtttcttcacaaaaggagaatgca
tcagcatccaacggtaggttatctccagtgttattaacggaatgtgataaatatgaaaat
ggggatcaacatgaagcttcttcaagtgactctggatccatgtctgatcatgaaacaaaa
tccgataagaaatcagctggcaaacgtatcatacggcaggctaaaaggcacaggcaggaa
gatatggcttatgagggagatgctgattgggagacactgatatatgaacaacatttgttt
gcgaatcatcaagatggagacaagtatcagccaactaaaacaaagggaaaactcgatttc
ttgcaaactatctctttggaggcagaaaatggtggggttgcagctgtttcagttggatta
aaagctcgtgctgcaggtcccgttgagaagatgaagtttaaggaactattgaagcgtaaa
ggcgggcttcaagaatatatagagtgcagaaatcatattctacatctttggaacaaggat
gtaactcggatattacctttatcagagtttaaaatatccgatacagctatagaaaatgaa
catccacaagcttctctaattagggatatttacttgtttctggaccattatggttacata
aactctggagttgcttctataaaggagatgtcaaatgggggcgtgaagcccaattttagg
ctttcaggagaggagaatgatggccgaaaatctggagctccggttaccgatttggatgac
ggagtttcctttattcttggcagggccaaaagctgtgatgtattgatatctgaaaatgat
gcggcaacagaacatccagatgtgattgttcacaaagatgagggcgttcatgtgcctgat
ccacctggcaaatgcctagaaatgatctgccatagtgaaaatttaccagagtcttctggt
actagagtagcgaattcagctggtcaaaaggagccgactgtgtgtttgcagtgtgatgat
tcagaaacaagaaagaaaattataataattggagggggtccagctggattaacagctgct
cggcacttgcagcgtcagggtttccatgtgactgtgctggaggggcgagatagaattggt
ggtcgcgtatatacagacacgtcatccctttcagtgccagtagatctcggggctagcatt
atcacaggtgttgaggctgatgtcacttcccaaagacgacccgacccatcttcattagtt
tgcgcacagttgggccttgaactgactgttttgaacagcgattgtcctctctatgacact
gttacaggccataaagttccttctgatgtggatgaagctctcgaggctgaatacaatagc
ctacttgatgacatgcaattagttgtagcccaaaagggcgatcgtgcaatgaaaatgtct
ctcgaagaaggtttaaagtgtggacttaaagttcggcgtggaagatctgataaaactagt
gccggtgagatcttgaatcctcttgaaaggagggtcatggattggcattttgctcattta
gaatacggctgtgcggcttcactacaagaagtatctcttccatgttggaatcaagatgac
atatatggaggatttggtggtgcccactgtatgattaaaggtggttatggtgcgattgtt
gattcgcttaaagatggacttcatatccacctcaaccatatggttactgacatttgctat
gaatcacaaaaaaaggtcaaagtgtccacagcaaatagcaaggagttcacaggagatgca
gttttgatcactgtgccactaggctgtttaaaagccgaaaccataaagttttatccacca
ttacctgaatggaagtactcttccatccaaagacttggttttggtgtactcaacaaagtt
gttttggaattccccgaagtattttgggatgactcagttgattactttggagctactgca
gaagaaaccgatcagaggggttggtgcttcatgttttggaatgtcaggaaaacggttaat
gcacctgttcttatagcattagtggtcggaaaggcagccatcaatggtcaaaatttaacc
tcatccgaccatgtaaatcacgcattagtggttcttcgaaagctttttgggaacagtgcg
gtacgtgatccagttgcatctgtggttacagattggggacgcgaccctttcagctacggt
gcttactcatatgttgctgttggggcatccggtgaagactatgacacattgggtcggccc
atcaacaactgtttattctttgctggtgaagccacgtgcaaggaacatccggataccgtt
ggtggtgcaatgattagtgggatgcgggaagcggttcgtatagttgatatactaactaca
ggaaatgattttacagcagaagtagaagctattgtggctgcaaagaggcattctgacagt
gaaaggagtgaagttagggacattattagaagacttgatgctatcgaactcacaaatgtt
cataaaaactctttgctacagaatatgttttttagtgcgaagagtcgatccgggaggttg
catcttgctaaagagctattgaatcttccttctgatgttcttagatcttttgctggatct
aaagaagggctcggtgttctcaattcatggatgctggattcaatggggaaaaatgggacc
caactgttgcgacaatgtgttcgtcttcttgtgcgtgtatctacggatttacttgctgtc
cgtctttcaggtattggtaaaactgtgaaagagaaggtttgtgttcatacaagccgggat
atacgtgctatagcgagccagcttgttagtgtatgggttgagatattccgaaaggagaag
gcgtctaatggcggtttgaagttattgaggcaatcaagtgctgtagatgcttctaaaagc
agatctcatgctgcttcagggaaaccgcctctgcgtgctcatcttacatcatccgagaat
agagctatgaagggtgtatctgtaagctcatataatcgaaaagggaatgctgcagctgta
acaaaggctgaaaatagaccatctagttctcaaggttcagcaggaaggcaaaattgtcag
gaggaagattacatagatttaccaatgtccgaagaggaacaagctgcttttgatgctgca
gaagccgctcgtgctgctgcacttgcagctgccgaggcatatgcatcatctggtgccaag
agcagtactccctttcagctgccaaagataccatcttttaacaagttcgcaagacgggag
cagtatgcacaaatggatgagtctgagtaccgaaagaagtgggctggcggtgttacaggg
cgtcaagagtgtatatctgaaatcgattctagaaactgtagagtaagagactggtcagtc
gaattttctgcggcaggagtcaaccttgagagttcaaaaataacgggtgataatcgctca
cagcggagccactcgaatgaaaatgcgggcccggtgcattacagagagcactcaggtgaa
agtgcaggcattgacagcagcatatttacaaaagcatgggttgatagtgcaggtagtgaa
gggttaaaagaccatagtgccattgacagatggcaaactcaagcggctgctgctgattcg
gatttcttcaataggactaattatttaatggatgaagaggattcaaatatgagcctaaaa
ccgtcaattaacaggcatgatggtttggcgaatgagagctcggcttctcaagttactgtg
aacagggagttaatgggtaaccaaccccgaggagtagataagattaaaaaatctgttgtt
gattatgtggcatcacttcttatgcctctttataaagcaagaaaaattgacaaagaaagt
tacaaatcgataatgaagaaaacagccacaaaggttatggagcagactacagatgcagaa
aaattaatggctgtatttgagtttcttgattttaagcgcaaaaacaagataagagcattt
gtggacaggttaatcgagaggcatatggctatgaagacagatgccaaatctggatgttcc
tga
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integrated database retrieval system
