Erigeron canadensis (horseweed): 122586965
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Entry
122586965 CDS
T07610
Name
(RefSeq) vacuolar protein-sorting-associated protein 33 homolog isoform X1
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122586965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122586965
Membrane trafficking [BR:
ecad04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
122586965
Hops complex
122586965
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sec1
Pribosyltran
DUF2067
Motif
Other DBs
NCBI-GeneID:
122586965
NCBI-ProteinID:
XP_043614948
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All DBs
Position
2:24332145..24338275
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AA seq
597 aa
AA seq
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MAQIPNLQNGPINFTPIRDQSQKELITILKNIRGKKCLVIDPKLGGSLSLIVQTSLLKEH
GAELHHLNADPIETTCTKVVYLVQTQLHLMRFISTHIHNDTSKGLQREYFLYFVPRRAVA
CEKLLEEEKVHNLLTIGEFPLYALPLDEDILSFELDLSYKECLTDGDTTSLWHIAKAIHK
LEFLYGLIPNVRAKGKASVRVANMLNRMQDEEPVNSTDTDVPEINTLIILDRECDMVTPM
LSQLTYEGLLDEFLHINNGAVEIDASIMGASGQDGKKMKVPLNSTDKLFKETRDLNFEVV
VQVLRQKATSMKQDYTEMSTTNQTVSELKDFVKKLNSLPEMTRHINLAQHLSTLTSKPSF
LGRLDMEHTIVEAESYDICFEYIEEMIHKQEPLVGVLRLLISLSVTNAGLPKRNFDYLRR
EILHSYGFEHIATLNNLEKAGLVRKQEGKNNWPTIKRNLQLVAEDNDTANSPKDVSYVFS
GYAPLSIRLIQHAIRLGWRPLEEILKLLPGTHTESKRSAFANSPSYDILPGGTQMERTED
GRRSIVLVVFVGGVTYAEISALRYLSSQEGMAYDIIIGTTKIVNGNTLTETFMGNLG
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggctcagattcctaatttacaaaatggacctatcaatttcactcctattagagatcag
tctcagaaggagctcattacaatcctcaaaaatattcgtggcaaaaagtgtttggtaatc
gatccgaagctaggcggttctctttcgttgattgttcagacttcacttcttaaggaacat
ggggctgaactacaccatcttaatgcagatccaatcgagactacgtgcactaaagttgtc
taccttgtacaaactcagcttcatttaatgagatttatttctacacatattcacaatgac
acctcaaaggggctccagagagagtattttctatattttgtacctcgtcgtgctgttgcg
tgtgaaaaacttctcgaggaggaaaaagttcataatctactaacaattggggagtttccg
ctgtatgccttaccactggatgaggatatattatcgtttgaacttgatttatcttataaa
gaatgccttactgatggtgatacaacctctctttggcatattgccaaagccatccacaaa
cttgagtttttgtatggtttgataccaaatgttagggcaaaaggaaaagcatctgtacgt
gttgctaacatgctaaaccgtatgcaagatgaagaaccagtcaactctactgatacggat
gtccctgagataaatactctgatcatcctggacagagagtgtgatatggttactccaatg
ttatctcagttgacatatgaagggcttctggatgagtttttacacatcaataatggtgct
gtggagatagatgcatcaatcatgggtgctagcggacaagatggaaaaaagatgaaggtt
cctcttaattcgactgacaagctgtttaaggagactagggatcttaactttgaagttgtt
gtccaggttctacgtcaaaaagctacatccatgaaacaggattacacagagatgtcaact
actaaccagacggtctctgaattgaaggactttgtcaaaaagctcaactctttgccagaa
atgactaggcacataaatcttgctcagcacttatccacgcttacttcaaagccttcattt
cttgggcgacttgacatggaacacactattgtggaggctgagagctatgatatatgcttt
gagtacattgaagagatgatccataagcaggagcctcttgttggtgtcctacggctactc
atctcactttcagttaccaatgctgggttaccaaaacggaacttcgattatctaaggaga
gagattcttcacagctatggatttgaacacatagctactcttaataatttggaaaaagct
gggttggttaggaagcaggagggtaaaaacaactggccgactatcaaacgtaatcttcaa
ctggtagctgaggataacgatacagccaacagtcccaaagatgtttcatatgttttctct
ggatatgctcctttgagtattcgccttattcagcatgcgattcgattaggatggcgcccc
cttgaagaaatattgaaactgttgcctggtacacatacagagtcaaaaaggagtgcattt
gcaaacagtccatcatatgatatactaccagggggtacacagatggaaagaaccgaagac
gggagacgctctattgttctagttgtctttgtcggaggagtaacatatgctgagatatct
gcactccgttatctcagttctcaggaagggatggcttatgacattatcatagggacaaca
aagattgttaatggtaataccttgactgaaaccttcatggggaacttgggttga
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