Erigeron canadensis (horseweed): 122587016
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Entry
122587016 CDS
T07610
Name
(RefSeq) protein EXPORTIN 1A
KO
K14290
exportin-1
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03008
Ribosome biogenesis in eukaryotes
ecad03013
Nucleocytoplasmic transport
ecad03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122587016
03008 Ribosome biogenesis in eukaryotes
122587016
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122587016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122587016
03009 Ribosome biogenesis [BR:
ecad03009
]
122587016
03016 Transfer RNA biogenesis [BR:
ecad03016
]
122587016
03036 Chromosome and associated proteins [BR:
ecad03036
]
122587016
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
122587016
Ribosome biogenesis [BR:
ecad03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
122587016
Pre-60S particles
122587016
Transfer RNA biogenesis [BR:
ecad03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122587016
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
122587016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
122587016
NCBI-ProteinID:
XP_043615011
LinkDB
All DBs
Position
2:complement(30487067..30498751)
Genome browser
AA seq
1072 aa
AA seq
DB search
MAAEKLRDLSQPIDVGVLDATVAAFYGTGSKDERTAADQILRELQNNPDMWLQVVHILSN
TQNLNTKFFALQVLEGVIKYRWNVLPVEQRDGMKNYISDVIVKLSSNEGSFRLERLYVNK
LNIILVQILKHEWPAKWRSFIPDLVTAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQ
KIKDLKQSLNSEFQLIHELCLYVLSASQRPELIRATLATLHAFLSWIPLGYIFESPLLET
LLKFFPMPSYRNLTLQCLTEVAALNFGDFFNAQYVNMYNIFMVQLQIVLPTNANIPYAYA
NGSSEEQAFIQNLALFFTLFYKFHIRVLESAQESINTLQIGLEYLTRISYVDDTEVFKVC
LDYWNSLVSELFEANHNFENPASTANMMGLQMGMVDGLGTQLMRRRQLYAAPMSKLRLLM
ISRMAKPEEVLIVEDENGNIVRETLKDNDVLVQYKIMRETLIYLAHLDHDDTEKQMLKKL
SKQLNGEDWTWNNLNTLCWAIGSVSGSMMEEQENRFLVMVIRDLLNLCEITKGKDNKAVI
ASNIMYVVGQYPRFLRAHWKFLKTVINKLFEFMHEIHPGVQDMACDTFLKIVQKCKRKFV
LVQVGENEPFVSELLTTLPTTIADLEPHQIHTFYESVGQMIQAETEATKRDEYLQRLMNL
PNQKWAEIIGHARGNVDFLKDQDVIRTVLNILQTNTSVASSLGTYFLPQITLIFLDMLNV
YKMYSELISSSIAEGGPYASRTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVPPM
MDPVLGDYARNLPDARESEVLSLFATIINKYKIAMIDDVPRIFEAVFQCTLEMITKNFED
YPEHRLKFFSLLRAIATYCFRALIMLSPEQLKLVMDSVMWAFRHTERNIAETGLNLLLEM
LKNFQNSEFCNQFYRSYYVLIVQEIFAVLTDTFHKPGFKLHVLVLQHLFCLVESGSLTEP
LWDASTVPYPYPNNGMFVREYTIKLLGASFPNISASEVSKFVNGLFDSRADLGTFKNHIR
DFLVQSKEFSAQDNKDLYAEEAAAQKERERQRMLSIPGLIAPNEIQDEMVDS
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgaaaagcttagagatttaagtcagccaattgatgttggcgttcttgatgct
actgttgctgccttttatggcactggatctaaagatgagaggactgcagctgatcaaatt
ttgcgggagttgcaaaataatccagacatgtggcttcaagtggttcacattctttcaaat
acgcagaacttgaataccaagttctttgctttacaggttcttgaaggcgttatcaagtac
aggtggaatgtattgcctgtagaacaaagggatggaatgaaaaactacatatcggatgtt
attgtaaagctttccagtaacgagggatcttttcgcctagaaaggttgtatgtcaataaa
cttaacattatactagtccagattttgaagcacgagtggccagccaagtggcgcagcttc
atacctgatctggttacagcagcaaaaactagtgaaacaatatgcgagaattgcatggct
atattaaaacttctaagtgaggaggtgtttgatttctcaaggggtgaaatgacccaacag
aagattaaagacctgaaacaatctttgaacagtgagtttcaactcatacatgagctatgc
ttatatgtgctatcagcatctcaaagacccgagcttattagagctacattagccacgttg
catgctttcctttcttggattcctttgggctatatttttgagtctccactgctggagaca
cttcttaagttttttcccatgccatcatatcgtaatctaactcttcagtgcttgacagag
gttgctgccctaaacttcggagattttttcaatgctcaatacgttaatatgtataacata
tttatggtccagttgcagattgttctacctacaaatgcgaatataccctatgcttatgca
aatggttcttccgaggaacaggcatttattcagaatttggcattgttttttactttattt
tacaagtttcatattcgtgtactggaatctgcacaagaaagcatcaatacacttcagatt
ggccttgagtatctcacacgcatttcttatgttgatgatactgaggttttcaaggtttgc
ttggactactggaattctctggtgtcggaactttttgaggcaaaccacaattttgaaaac
cctgcatcaactgcaaacatgatggggttgcagatgggtatggttgatggtcttggtaca
cagttgatgcgaaggaggcaactatatgctgcaccgatgtcaaagctaagattactaatg
atatcacgcatggcaaagcctgaagaagtattaattgtggaagatgaaaatgggaatatt
gttcgtgaaactttgaaggataatgatgttcttgtccagtataagattatgcgggaaacg
cttatttacttggcacatcttgatcatgatgatactgaaaagcagatgttgaagaaattg
agtaaacaactgaatggcgaggactggacttggaataacttgaatacactgtgttgggct
ataggatcggtttctggatccatgatggaagagcaggagaacaggtttctcgttatggtt
atacgtgacctactgaatctctgtgaaataactaaaggaaaggacaacaaagctgttatt
gcaagtaatatcatgtatgttgttggacaatatccaagatttttacgggcccattggaag
tttttgaaaaccgttataaacaagttgtttgagttcatgcatgaaattcatccaggagtt
caggatatggcttgcgacacctttttgaagatagtacagaaatgcaagcgcaagtttgtc
ctagtgcaggttggagagaatgagccatttgtctctgaacttctcacaacgcttccaacc
accattgcagaccttgaaccccaccagatacatacattttatgaatcagttggtcagatg
attcaagcagaaaccgaggcaacaaaacgggatgagtatctgcagaggttgatgaatctt
cccaatcagaaatgggccgagattataggacatgcacgtggtaatgttgatttcttgaag
gatcaagatgttattaggacggtgcttaacatattgcagacaaatacaagtgttgccagc
tcgcttggaacatatttcttgccacaaataactctaatctttttggacatgcttaacgtt
tataaaatgtacagtgaacttatatcatctagcattgctgaaggggggccctatgcttcc
aggacttcctatgtgaagcttctgaggtcagtaaagagggaaaccctcaagctcattgag
acttttctggataaggctgaagatcaaccacagattggaaaacagtttgtgccccctatg
atggatcccgtattgggtgactatgctcggaatttgcccgacgctcgagaatctgaagtt
ttgtctctctttgccacaataataaacaagtacaagattgcaatgatagatgatgttcct
cgtatatttgaagctgttttccaatgcactctggagatgataaccaagaactttgaagat
taccctgagcacagactcaagttcttctcattactgcgggccatagctacatattgtttt
cgagctttaatcatgctttcacccgagcaattgaaacttgtaatggattctgtcatgtgg
gcatttcgacatacggagaggaacattgcggaaactgggcttaatctcttattggagatg
cttaaaaacttccagaattccgagttctgtaatcagttctaccgatcttattatgtgctt
atcgtgcaagaaatatttgctgtcttgacggacacattccataaaccgggatttaaattg
cacgtcttagtgcttcaacatttattctgcctggtggaatctggttctctgactgagcct
ttatgggatgcatccactgtgccgtatccatatcctaacaatgggatgtttgttagagag
tatactattaagcttcttggtgcctccttccccaacatttcagcatctgaggtctcaaag
tttgtaaatggactcttcgactcgagagctgatcttggaacattcaaaaaccacatacgg
gactttcttgttcagtcaaaagaattttcagcacaggacaacaaggatctgtatgcagaa
gaagcagctgctcagaaagagagagaaagacaacgaatgcttagtattcccggacttatt
gcacccaacgagattcaagacgagatggttgactcatag
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