Erigeron canadensis (horseweed): 122587056
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Entry
122587056 CDS
T07610
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122587056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecad03041
]
122587056
Spliceosome [BR:
ecad03041
]
Common components
Common spliceosomal components
SR proteins
122587056
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
122587056
NCBI-ProteinID:
XP_043615062
LinkDB
All DBs
Position
2:complement(2410155..2414412)
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AA seq
257 aa
AA seq
DB search
MSHFGRAGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA
FVRYKYADEAQKAVEKLDGRVVDGREIMVQFAKYGPDAERIHKGRILEPVEKLKGRSRSR
SPRPSSRHRDDYKDRDYRRRNRSRSRDRSEHERSRGRDRDRYHSRSRTRSPDYRRERRRS
RYDDDKDRSRSPVRSVSPSAQRSGSPRKSLSPRRSLSRSRSPVASGEKDRSATPKSVSPP
AKADSRSPSPQRSDADE
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgtctcactttggaagagcaggtcctccagatatcagagatacatattctcttcttgtt
ctcaatatcaccttccgtacaactgctgatgatttgtttccactttttgataagtatgga
aaagttgttgatgttttcattcctagagatcgaaggactggggattcaaggggatttgca
tttgtgagatataagtatgcagacgaggcacaaaaggcggtcgaaaaacttgatgggaga
gttgttgatgggagagagataatggtacagtttgcgaaatacgggccggatgctgaacga
attcacaagggaagaatattggaaccggtagaaaagttgaagggaaggtcaaggagccga
agtcccaggccaagttccaggcatagggatgattataaggacagggattataggcggagg
aaccgcagtagaagcagggatcgatctgaacatgagagatctagaggaagagatagggat
cgttaccacagtaggagtcgcaccagaagccctgattatcgcagagaacgcaggagatcc
agatatgatgatgataaggataggagccggtctcctgtcaggagcgtttctccttctgca
cagcgcagtggtagcccacgtaagagtctttctccacgcagatcactttcaaggagcaga
agtcccgttgcatctggtgaaaaagatcgctcagccacccctaaaagtgtttcacctcct
gccaaagctgattctcgaagcccatcaccccaacgttctgatgcagatgaatga
DBGET
integrated database retrieval system
