Erigeron canadensis (horseweed): 122587137
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Entry
122587137 CDS
T07610
Name
(RefSeq) vacuolar protein sorting-associated protein 45 homolog
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122587137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122587137
Membrane trafficking [BR:
ecad04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
122587137
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
122587137
NCBI-ProteinID:
XP_043615161
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All DBs
Position
2:complement(20397761..20408334)
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AA seq
568 aa
AA seq
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MVLISSVRDYINRMLQDISGMKVLILDSQTVSTVSVAYSQSELLQKEVFLVELVDSISMS
KESMSHLKAVYFLRPTSENIQHLKRQLAKPRFGEYNLFFSNMLNTTQLHILADSDEHEVV
QQVQEFFADFVAIDPYHYTLNIPSNHMYMLPAVIDPPNLQNYCDRIVDGLAAIFLAFKRR
PVIRYSRTSDIAKRIAHEASKLMYQQESGLFDFRRTEISPLLLVIDRRDDPVTPLLNQWT
YQAMVHELIGIKDNKVDLGNVGKFSKDQQEVVLSSEQDAFFKANMYENFGDIGMSIKRMV
DDFQQVAKSNQNIQTIEDMAKFVDNYPEYRKMQGNVSKHVTLVTEMSKIVEERKLMLVSQ
TEQELACNGGQGAAFEAVTNLLNNESVSDIDRLRLVMLYALRYEKESPVQLMQLFNKLAS
RSPKYKPGLVQFLLKQAGVDRRTGDLYGNRDILNIARNMARGLKGVENVYTQHQPLLFQT
MESIIKGRLRDVDYPFVGNHFQQGRPQEVVIFIVGGTTYEESRSVALQNAFNSGIRFILG
GSSLLNSKRFLKDLEEAQRIARSSTGVV
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggtgttgatatcatctgtaagagattatataaatcgaatgttacaagatatttctggc
atgaaagtcctcattcttgattcccaaacggttagcactgtcagtgttgcgtattctcag
tcagaacttctgcaaaaagaagtgtttttggtagaattggttgattccatctctatgtca
aaggagtctatgtcacatctcaaagcagtttattttttgcgtccaacatcagagaatatt
cagcatttgaaacggcaactggctaaacctcgatttggagaatataacctttttttctca
aatatgttgaatactacccagcttcatattttagctgactcggatgaacatgaagttgtt
caacaagtccaggagttctttgccgattttgttgcaattgacccctaccattacactttg
aacataccatcaaatcatatgtatatgcttccagctgttatagatcctccaaacctgcaa
aactactgtgatcgaattgttgatggacttgcagctatctttttggctttcaaaaggaga
cctgtcattcgatattcacgtacatctgatattgctaaaaggatagcacatgaagcttcg
aagctgatgtaccagcaggaaagtggcctttttgatttcagacgcacagaaatttctcct
ttgttgcttgtaattgataggagagatgaccctgttactccattactgaatcagtggact
tatcaggccatggtccatgagttgataggtattaaagacaataaggtagatttaggaaat
gttgggaagttttcgaaggatcaacaggaggtcgtgttgtcgtctgaacaagatgccttt
ttcaaggctaatatgtatgaaaattttggagatatcggaatgagtataaagcggatggtg
gatgattttcaacaagtggcaaaaagcaatcagaacattcagacaatagaggacatggct
aaatttgttgacaattatccggagtatagaaagatgcaagggaatgtctctaagcatgta
acactggtgacagaaatgagcaagatcgttgaagagagaaaactcatgctagtttcacaa
acggaacaagagttggcttgcaatggtggccaaggggcagcatttgaggctgtcacaaat
cttttgaataatgaaagtgtctctgatattgaccgactacgccttgttatgctgtatgct
ttgagatatgagaaagagagccctgttcaactgatgcagctttttaataagctggcttct
cgctctcccaagtataagccagggcttgtacaattccttctaaagcaagcaggggttgat
agacgaaccggagatctgtatggtaacagggatatcttgaatattgcccgtaatatggct
cgtggattgaagggagttgagaatgtatacacccagcatcaaccgcttctgttccaaaca
atggagagcatcataaaaggaaggttgagagatgtggattacccgtttgttggaaatcac
tttcaacagggcaggccacaagaagtggtgatcttcattgttggtggaacaacatatgag
gaatcacgctcagttgctctacagaacgcgtttaattctggaattcggtttatacttgga
ggttcctctcttttgaattctaaaaggtttcttaaggaccttgaagaagctcagcgtatt
gcccgatcaagcactggtgttgtttaa
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