Erigeron canadensis (horseweed): 122587142
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Entry
122587142 CDS
T07610
Name
(RefSeq) eukaryotic translation initiation factor 2A
KO
K15026
translation initiation factor 2A
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122587142
03012 Translation factors [BR:
ecad03012
]
122587142
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
122587142
Translation factors [BR:
ecad03012
]
Eukaryotic type
Initiation factors
eIF-2A
122587142
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WDR55
Beta-prop_WDR35_TULP_N
RMC1_N
Motif
Other DBs
NCBI-GeneID:
122587142
NCBI-ProteinID:
XP_043615165
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Position
2:25937614..25946628
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AA seq
517 aa
AA seq
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MSVADSSPALEILVREPAGFSIWNGPPFSNNQPSIKLDKVPCTSAKFSDDGSRLMVIKSE
SSISIFDCKTLKEIRAFESPNILAAALSPCGTYLQTFQKAASPQEKNVTLWKVETGELVY
SLSQKNITKATWPTIRFNSDEAVASRMATNELQFFDAADFSKGIVHKIRVPGIASAELSK
NPGSHVAAFVPESKGMPGSVQIYACAPGSQTEPITRRNFFRCSSVQLHWNLGSTGLLVVV
QADVDKTNQSYYGETKLNYLTLDGSYDGLVSLRKEGPVHDVQWSSSGKEFAVVYGTMPAM
ATIFDKKCKPLMELGEGPYNTIRWNPKGRIILVAGYGNLPGYMAFWDYVDKKQLGTTKSE
WSVTSEWSPDGRYFLTATTAPRLQVDNGIRIFHYNGKSCFKKKFDKLYQVDWKAESADKF
GEIEELVKSVGSLTVESKPQGQGSKSSQTPVKPINPPVQKKPAAYKPPHAKAAAAKEAEL
FGGISPSAEMSKNALKNKKKREKQREKKAAEAGSAAD
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgtcagttgcagattcatcaccagcattagagattttagttagagagccagcgggtttt
tctatatggaacgggcccccttttagtaataatcagcctagtataaagctcgataaagtt
ccctgtacgagtgcaaaatttagcgatgatggatccagactcatggtgataaagtccgag
tcttctattagcatctttgattgtaaaaccttgaaagaaataagagcttttgagtccccc
aacattcttgccgctgctttatctccatgtgggacttatcttcagaccttccagaaagcg
gcgtcaccacaagaaaaaaatgtcacgttatggaaggtagagacaggagaattagtttat
tctttgtctcagaagaacattactaaggcaacatggccaacaatcagatttaactctgat
gaagcagttgcttctcgtatggcaacaaatgagcttcagttctttgatgctgctgatttt
tccaaaggcattgtacacaagattagagttcctggaatagcttcagcagagctatctaag
aatccaggatcccatgtggctgcgtttgttccagaatccaagggaatgcctggtagtgtt
cagatatatgcttgtgctcccggttcccagactgaacccattactcgaaggaatttcttc
cggtgttcatcagtgcaactacattggaacctcggttcgacagggcttctggttgtggtg
caggcagatgttgataaaaccaaccagagttactatggagaaacaaagctaaattacttg
acattagatggctcttatgacgggctggtatcactacgtaaagaaggacctgtacatgat
gttcaatggtcgagctcgggaaaagagtttgcagttgtttatggaactatgccggcaatg
gcaacaatatttgacaagaagtgcaaacctctgatggagcttggggaaggcccttacaat
accattcgttggaacccaaagggaaggattatattagtggcaggttatggcaacttacct
ggttatatggcattttgggactacgtcgacaaaaagcaacttgggaccaccaagtctgaa
tggtcagtgaccagtgaatggtcccctgatggacgctatttcttgaccgccacaacagct
ccaaggctgcaagttgacaatgggataagaattttccattacaatggaaaatcatgcttc
aagaaaaagtttgataaactgtatcaggttgattggaaagcagagtcagctgataaattt
ggcgaaattgaagaacttgtcaagtctgttggctcattaacagttgaaagcaaaccacaa
ggacaagggtcaaaatcttcccagacccctgtgaaaccgatcaatcctcctgttcagaag
aaacctgctgcatataaaccacctcatgcaaaggctgcagctgccaaagaggcagagctc
tttgggggaatcagcccttcagcagaaatgagcaagaatgcattaaaaaacaagaaaaag
agggaaaaacagagggagaagaaggctgctgaagctggttctgctgcagactaa
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