Erigeron canadensis (horseweed): 122587221
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Entry
122587221 CDS
T07610
Name
(RefSeq) U-box domain-containing protein 14-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122587221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122587221
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122587221
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
U-box type E3
122587221
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
zf-RING_UBOX
Arm_2
zf-Nse
zf-C3HC4_4
ARM_LIN_C
zf-C3HC4_2
zf-C3HC4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
122587221
NCBI-ProteinID:
XP_043615265
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All DBs
Position
2:24382320..24386555
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AA seq
630 aa
AA seq
DB search
MSNKKGSELVSQLVDSVREFSGLHECRNIVKDMYGNLVRRVKLLSPLFEELKDSDQKFCD
DDLQGFKSLKVSLDLALELLISVNEGSKTFQALQIDKTIDKFHAVTTHIEEALCKINYNK
LDIPEEVQEQIQLVHLQFKRAKGQKEFIDVQLQKDLAMLKKGVEPEPEVVKRLSEKLHLT
SINDLRKESLAIHDMVILTGGDLENCFETMSFVLKKINDFVMLRNPENDGSESDREKGFL
RHRSPIIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLLHTAL
TPNYVLKSLIALWCDSNGIDLPRSQGNSKNIKAGRTGSECDQTAINALLEKLTNGNLGDQ
RAAAGELRLLAKRNSDNRICIAETGAIPILVELLSSRDSRTQEHAVTALLNLSIHEANKG
IIVSVGAIPEIVDVLKNGSMEARENAAATLFSLSVVDENKVAIGAAGAIPPLIDLLQEGT
PRGKKDAATAIFNLCIYQGNKVRAVRAGIVTPLMRLVKDASSGMMDEALAILAIIAGHYE
GKVAIGQANPIPVLVEVVRTGSPRNRENGIAILWCVCANDISFLKIMKVVGGEEVLKELC
ENGTDRAKRKAGSLMELLEQVELAEPVVNL
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaaaaagggagtgagttagtgagtcaactggttgactcagtgagagaattt
tcagggttacatgagtgcagaaatatagtaaaagatatgtatggaaatttggtgagaagg
gtaaagcttttgagtcctttatttgaagaattaaaagatagtgatcaaaaattttgtgat
gatgatcttcaaggatttaagtctttgaaagtttctttggatttggctttggagcttttg
atatcagtcaatgaaggaagtaaaacttttcaggcgttgcaaatcgataaaaccattgac
aagtttcatgcagttaccacacatattgaagaggcattatgcaaaatcaattataataaa
cttgatatacccgaggaagttcaagaacagatacaacttgtgcacttacaatttaaaaga
gcaaaagggcaaaaggagtttattgatgtacagcttcaaaaagatttggccatgttgaaa
aagggcgtggaacccgaaccagaagtggttaaaagactttcagaaaaactgcatcttaca
tcgattaatgatttaaggaaggagtcacttgcaattcatgatatggtcatattgactggc
ggagatcttgaaaattgttttgagacaatgtcgtttgttcttaagaagataaatgatttt
gtgatgttgagaaatcctgaaaatgatggctctgaatctgatcgtgaaaagggcttcttg
aggcatagatctccaataattcctgatgattttcggtgcccaatatcgcttgaattgatg
aaagatccagtgattgtctctactgggcagacttatgaaagatcttgtatccaaaaatgg
ctagacgctggacacaaaacgtgtcccaaaactcagcagactttactacatacagcgttg
acccccaactacgttttgaagagtctaatcgctttatggtgcgatagtaatggcatagat
ctacccagatcacaaggaaactctaaaaacattaaagctggaagaactggttcagagtgt
gaccaaactgcaatcaatgctttacttgaaaaactcacaaatgggaacttgggtgatcaa
cgagcagcagctggcgaacttcgattactagcaaaaagaaacagtgataacagaatatgc
atagccgaaactggtgccattcctatcttagtggaattattatcttctcgagatagcaga
acacaagaacacgccgtcacagcacttttgaacttatcaatacatgaagccaataaagga
attattgtaagtgttggagccatacccgagatagtagacgtgttaaagaatggaagcatg
gaggctcgagagaatgcagcagcaaccctttttagcttgtcagtggtggacgaaaataaa
gtggccatcggagctgctggtgctataccacccctaattgatctgcttcaagaaggaact
ccgagagggaaaaaagacgcagccacggccatttttaacctctgtatatatcaaggaaac
aaggtgagagccgtacgtgcaggaatcgtgactccattgatgagattggttaaggatgct
agtagtggaatgatggatgaggcattggctatattggctataattgctggtcactatgaa
gggaaagtggcgattggtcaagctaaccccatcccggttttagtggaggtggttagaacc
gggtcaccacgcaaccgggagaatggaattgcgattttgtggtgtgtgtgtgcaaatgat
atcagttttttgaagataatgaaggttgttggaggagaggaggtgttgaaggaactgtgt
gagaatggaactgatcgagctaagcggaaggccgggagtttaatggaacttcttgagcaa
gtcgagcttgctgaacccgtggttaacctatga
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