KEGG   Erigeron canadensis (horseweed): 122587232
Entry
122587232         CDS       T07610                                 
Name
(RefSeq) autophagy-related protein 3
  KO
K08343  ubiquitin-like-conjugating enzyme ATG3
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad04136  Autophagy - other
ecad04145  Phagocytosis
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    122587232
   04136 Autophagy - other
    122587232
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ecad04131]
    122587232
   04121 Ubiquitin system [BR:ecad04121]
    122587232
   03029 Mitochondrial biogenesis [BR:ecad03029]
    122587232
Membrane trafficking [BR:ecad04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    122587232
Ubiquitin system [BR:ecad04121]
 Ubiquitin-conjugating enzymes (E2)
  UBL-conjugating enzymes
   122587232
Mitochondrial biogenesis [BR:ecad03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    122587232
SSDB
Motif
Pfam: Autophagy_act_C TCAF_N DUF7331
Other DBs
NCBI-GeneID: 122587232
NCBI-ProteinID: XP_043615278
LinkDB
Position
2:complement(29801332..29808672)
AA seq 314 aa
MVLTQKIHEAFKSTAERIMSHRTDTAFKDKGVLSVTEFVAAGDNLVSKCPTWSWESGDPN
KRKSYLPADKQFLITRNVPCLRRVASIQEEYEAAGGEILLDDENNDGWLATHGQPKDTRG
NEEENVPSMETLEISKKTNIQTISSHFGNDDEEDIPDMEEFEEPDNLIETDLATLQPTYL
VAHEPDDDHILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLEPELVLEDVSQDHARKT
VTIEDHPHLPGKHASVHPCKHAAVMKKLIEPLIAGGLEPQVDKYLFLFLKFVATVIPTIE
YDYTMDFDLGSSSS
NT seq 945 nt   +upstreamnt  +downstreamnt
atggttttaacacaaaagatacatgaagccttcaaaagcacggcagagagaataatgagc
catagaactgatactgctttcaaagataaaggtgttttatccgtcactgaattcgtcgct
gctggtgataatcttgtttccaaatgccccacttggtcctgggaatctggcgatccaaac
aagaggaagtcatatttgccagccgacaaacaatttttgatcactagaaatgttccttgt
ttgcgaagagtcgcttcaatacaagaagaatatgaggctgctggaggtgaaatattgctt
gacgatgaaaataatgacggttggctggctactcatggacagcctaaagataccaggggt
aatgaggaggaaaatgtcccttctatggaaactctggaaataagcaagaagactaacatc
cagacaatttcttcacattttggcaacgatgatgaagaagacattccagacatggaagag
tttgaagaacccgacaaccttattgagacagatctggcaacccttcagcctacgtatctc
gttgctcatgagcctgatgatgaccatattttgcgaactcgaacttatgatgtcagcatc
acgtatgataaatattatcaaactcctcgtgtttggcttactggatatgatgagtctagg
atgcttctcgagccagaattagttcttgaagatgtcagtcaagaccatgctcgcaaaact
gtaactattgaagaccatccacacttaccggggaaacatgcgtctgtgcatccatgtaag
catgcagctgtgatgaagaaactaattgaacccctaatagctggaggacttgaaccacaa
gttgacaaatacctcttcttattcttgaaatttgttgccactgttattccaaccatcgaa
tatgattacaccatggacttcgacctgggaagctccagtagctga

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