Erigeron canadensis (horseweed): 122587277
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Entry
122587277 CDS
T07610
Name
(RefSeq) ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic-like
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ecad03110
]
122587277
Chaperones and folding catalysts [BR:
ecad03110
]
Heat shock proteins
HSP100
122587277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
TniB
nSTAND3
UVR
AAA_14
AAA_18
Mg_chelatase
NACHT
AAA_28
Zeta_toxin
AAA_25
IstB_IS21
Torsin
Motif
Other DBs
NCBI-GeneID:
122587277
NCBI-ProteinID:
XP_043615335
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All DBs
Position
2:43660147..43668796
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AA seq
921 aa
AA seq
DB search
MAGALVHAASFPVHKSKHLANGTGQVKRMVKMMACSYAPPMRMRTFSGLRSSNALDNIMR
TGHDFHSKVALATSVRQRKVGSRIVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQ
ILLGLIGEGTGIAAKVLKSMGISLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSL
EEARQLGHNYIGSEHLLLGLLREGEGVAARTLENLGADPSNIRTQVIRMVGESAETVGAG
VGGGSSNSKMPTLEEYGTNLTKLAEEGKLDPVVGRQSQIERVTQILGRRTKNNPCLIGEP
GVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQ
SDDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPAL
ERRFQPVKVPEPSVEETIQILKGLRERYEIHHKLRYTDDAVVAAAELSHQYISDRFLPDK
AIDLIDEAGSRVRLRHAQLPEEARALEKDLRQITKEKNEAVRGQDFEKAGELRDREMDLK
TQISALIDKTKEMSKAESEAGDEGPTVTEADIQHIVSTWTGIPVEKVSSDESERLLKMED
TLHTRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKSLAAYYFG
SEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHP
DVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNIGSSVIEKGGRRIGFDLDYDEKDSS
YNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLKVKEIEL
QVTERFRDRVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGN
VTVLNGSGGAPPEVLPEPITV
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggccggggctctagttcacgctgcttccttccctgttcataaaagcaaacatttggca
aatggaactgggcaggtgaaaagaatggttaaaatgatggcatgttcatacgcacctcca
atgaggatgagaaccttttcgggattacgaagttccaatgcattggataacattatgaga
acaggtcatgattttcattccaaagttgccttggcgacctctgttcggcaacgaaaggtt
ggcagtcggattgtgccaaaagctatgttcgagcgatttacagaaaaggctattaaagta
attatgcttgcacaagaggaagctcgtcgtttaggtcataattttgttggcacggaacaa
atattgttaggtcttataggcgagggaaccgggattgctgctaaggttttgaagtctatg
gggatcagtttgaaagatgcacgtgtggaagttgagaaaatcattggtaggggtagtggg
tttgttgctgttgagattccctttactcctcgagctaaacgtgttttggaactctcgttg
gaggaagcccgccagcttggtcacaactacattggatctgagcacttgctacttggtttg
cttcgagagggtgagggtgtcgcagctcgtactttggaaaatctaggagctgaccccagt
aacattcgcactcaggtgatccgaatggtcggtgagagtgcagaaactgttggtgctggt
gttggaggtggaagctctaacagcaagatgccgacacttgaggaatatggcacaaacttg
acaaagctagctgaggagggtaagctggatcctgttgttggaaggcagtcacaaatcgaa
cgagtcactcagattctgggacgtcgaacaaagaataatccttgcctcattggggagcct
ggtgtcggaaagacagcaattgcagaaggccttgctcaaagaattgcaaatggcgatgtc
cctgaaacaattgagggaaagaaggtgataaccctagatatgggtcttcttgttgctggc
acaaagtaccgtggggaatttgaagaaagattgaagaagttgatggaagagataaaacaa
agtgatgacattattctgtttattgatgaggttcacacactaattggtgctggagcagcg
gaaggtgcaattgatgctgctaatatattgaagccagctcttgctagaggtgaattgcag
tgtattggggctacgacacttgatgaataccgcaagcatattgagaaagatccagcatta
gaaagaagattccaacccgtcaaggttcctgaaccttctgttgaggaaacaatacaaatt
ttgaaaggacttcgagagcgatatgaaattcaccacaagcttcggtacactgatgatgct
gttgttgctgcagccgagttgtctcaccaatatatcagtgaccgttttcttcctgataaa
gcaattgatttgattgacgaagctggatctcgtgttcggcttcgccatgcacagctaccg
gaggaagcaagagcacttgaaaaagatcttagacagattacaaaggagaaaaatgaagcg
gttcgtggacaggactttgaaaaggcaggggagctacgagatagagaaatggatcttaaa
actcaaatatcagctcttattgataagactaaggagatgagtaaagctgagagcgaggcc
ggtgatgagggtcccaccgtgacagaagctgacattcagcatattgtctctacttggact
ggtatacccgtagagaaagtctcgagtgatgaatcagagcgccttctcaaaatggaagac
accctccacacgcgaatcattggtcaagacgaagcagtgaaggccataagccgtgccatc
cgccgagcccgtgttggtctcaaaaaccccaaccgtcctatagccagtttcatcttttct
ggacccactggtgtcggaaaatctgaacttgcaaaatcactagccgcctattactttggt
tcagaagaagccatgatccgtcttgacatgagtgagttcatggagagacacacagtctca
aaactcattggttcgcctcccggatatgttggttacaccgaaggaggtcaattaacagag
gcagtgcgccggcgcccttatactgtcgtactttttgatgaaattgaaaaggctcatccg
gatgtcttcaatatgatgcttcaaattcttgaagatggaaggttgactgatagcaagggg
cgaacagttgacttcaagaacacacttttaataatgacatcaaatataggaagtagtgtg
attgaaaagggtggaagaagaataggatttgatctcgattatgatgagaaagatagcagt
tacaatagaatcaagagtttggtcacggaggaacttaaacagtattttaggccagaattc
ctgaacagattggatgaaatgatagtgtttagacagttgaccaagttggaagttaaagaa
atagctgacataatgttaaaagaagtattcgaaaggttaaaggttaaagaaatagaactt
caggtgacagagagatttagggatagagtggtggaagaaggttataaccctagttatggt
gcaaggccattaagaagagctataatgaggcttctggaggatagtatggcggagaagatg
cttgcacgtgagatcaaggagggggattcagtcattgtagatgtcgattcagatggtaat
gtgactgttctgaatggtagtggtggagctccacctgaggtgttacctgaaccaattaca
gtgtag
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