Erigeron canadensis (horseweed): 122587321
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Entry
122587321 CDS
T07610
Name
(RefSeq) clathrin heavy chain 2-like isoform X1
KO
K04646
clathrin heavy chain
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04142
Lysosome
ecad04144
Endocytosis
ecad05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122587321
04142 Lysosome
122587321
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
122587321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122587321
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecad04147
]
122587321
Membrane trafficking [BR:
ecad04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
122587321
Exosome [BR:
ecad04147
]
Exosomal proteins
Proteins found in most exosomes
122587321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
Motif
Other DBs
NCBI-GeneID:
122587321
NCBI-ProteinID:
XP_043615389
LinkDB
All DBs
Position
2:complement(25753607..25764679)
Genome browser
AA seq
1727 aa
AA seq
DB search
MAAANAPITMKEALTLSSIGINPQFITFTNVTMESDKFICVRETSPQNSVVIIDMNMPMQ
PLRRPITADSALMNPISKILALKAQLPGTTQDHLQIFNIEMKAKMKSHQMPEQVVFWKWI
TPKMLGMVTQTSVYHWSIEGDSEPVKMFDRTANLSNNQIINYKCDPSEKWLVLIGIAPGS
PERPQLVKGNMQLYSVDQQRSQALEAHAASFASLKVPGNENPSILISFATKSSNAGQVTS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQISHKYGLIYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTSEASSVGGFYAVNRRGQVLLATVNESTIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTKGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYSPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHAHLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYSELPDIKRVIVNTHAI
EPQVCLTQLVYYVVFNKYGTQLDSFFQSLVEFFGTLSKEWALECMKDLLLVNLRGNLQII
VQVAKEYCEQLGVEACIKLFEQFKSYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIK
EVERVTRESNFYDAEKAKNFLMEAKLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEG
YVQKVNPGNAPQVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFL
EHLVSEGSQDVHVHNALGKIIIDSNNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYR
RGQCDDELINVTNKNSLFKLQARYVVERMDGDLWEKALNPENEYRRQLIDQVVSTALPES
KSPEQVSAAVKAFMTADLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMD
YINRLDNFDGPAVGEVAVEAQLYEEAFAIFKKFNLNVQAVDVLLDNIQSIPRAVEFAYRV
EEDAVWSQVAKAQLREGLVSDAIESFIRADDATHFLDVIRAAEDTECYHDLVKYLLMVRD
KTKEPKVDSELIYAYAKIDRLSDIEEFILMPNVANLHNVGDRLFDEALYEAAKIIYAFIS
NWAKLAVTLVRLQQFQGAVDAARKANSAKTWKEVCFACVDAEEFRLAQICGLNIIVQVDD
LEEVSEYYQNRGCFNELISLMESGLGLERAHMGIFTELGVLYARYRHEKLMEHIKLFSTR
LNIPKLIRACDEQQHWKELTYLYIQYDEFDNAASTVMNHSPEAWDHMQFKDIAVKVANVE
LYYKAVYFYLEEHPDLINDVLNVLALRVDHTRVVDIMRKAGQLPLVKPYMVAVQSNNVSA
VNEALNEIYVEEEDYDRLRESIDLHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWK
QSIALSKKDKVYKDAMETASQSGDRELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVA
LELAWLNNMIDFAFPYLLQFIREYTGKVDELIKDKIESIKESKAKENEEQDIVKQQNMYA
QLLPLALPAPPGMGGSQMGGGYGPPPPMGGMGMPPMPPFGMPPMGSY
NT seq
5184 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgctaacgctccgattactatgaaagaagctctcacgttatcgagtataggg
atcaatccacagtttattacgttcactaatgtaacgatggagtcggataagtttatatgt
gttcgtgaaacttcgcctcagaatagtgtggtgattatcgatatgaacatgccaatgcaa
ccgttgaggaggccaattacggccgactctgctcttatgaatccgatttccaagattttg
gctttaaaagctcaacttcccgggacaactcaagatcacctacaaatatttaatatcgag
atgaaagcgaaaatgaagtcccatcagatgcctgagcaggttgtgttttggaagtggatt
acacctaaaatgttgggaatggtaacccagacctcagtgtatcattggtcaattgaaggt
gattctgaacctgtgaagatgtttgataggacagccaatttatcaaacaatcagattatt
aactacaaatgtgatccatctgagaaatggttggtgttgattggaattgcccctggctca
cctgagagaccccagctagtcaaaggaaatatgcagctgtattctgttgatcagcagcga
agtcaagcacttgaagctcatgcagcatcatttgcttccttgaaagttccaggcaacgag
aatccttccattctcatttcttttgcaacaaaaagttctaatgctggacaggttacatca
aagttgcatgtcattgagcttggcgcccagccagggaagccctcgtttaccaagaaacaa
gcagatctatttttccctcccgactttgcagatgattttcctgttgccatgcagatatcc
cacaagtatggtttaatttatgtcatcaccaagcttgggcttctttttgtatatgatctt
gaaaccgctactgcagtatatagaaacagaattagcccagatccaattttcttgacatct
gaagcctcatcagtagggggcttctatgcagttaatagacgtggacaggtgctacttgcc
actgttaatgaatcaacaatcgtgccatttgttagtggacagttgaacaacttggagctt
gctgtcaatcttgccaaacgaggaaatctacctggtgcagagaatttggttgttcagcgt
ttccaagaattatttgcccaaaccaagtacaaagaagctgccgagcttgctgcagaatct
cctcagggtattcttcgtacaccagatacagttgcaaagtttcagagtgtacctgtgcaa
gctggacaaacaccgccattactgcagtactttgggacccttctgacgaaaggaaaacta
aatgcgtttgaatccttggaattatcccgcttagttgttaatcaaaacaaaaagaatctt
ttagagaattggttagctgaagacaagctggaatgtagcgaggaacttggagaccttgtg
aagactgtggacaatgatctcgcattgaaaatttacatcaaagccagggcaaccccaaaa
gttgtagctgcttttgctgagagaagggagtttgacaaaatattaatttactccaagcag
gttgggtattcacctgattatttgttccttctgcaaacaatccttcgaacggacccacag
ggagctgtcaactttgctttgatgatgtcgcaaatggaaggaggttgtcctgttgattac
aacaccatcacagatcttttccttcagagaaacttgatacgggaggcaacagcttttctt
ttggatgtattgaagcctaatttgccggaacatgctcacctccaaacgaaggtccttgaa
atcaaccttgtaacattccctaacgttgctgatgcgatattagctaatggtatgttcagc
cattatgatcggcctaggattgctcaactttgtgagaaagcaggactttatgtccgagcc
cttcagcattacagtgaattgccagatattaaacgtgtcattgtgaatactcatgcaata
gagccacaggtttgtctcactcaacttgtctactatgtggtttttaacaagtacggtacc
caattggattccttttttcagtctcttgtagagttttttggaactctatctaaggaatgg
gcactcgagtgcatgaaggatcttttgttggtcaatttgagaggaaaccttcagataatt
gttcaggttgccaaggaatactgtgagcagctaggtgttgaagcatgtattaaacttttt
gagcaatttaaatcatatgaaggcctttacttctttttggggtcgtatttaagttccagt
gaggatcctgatatacactttaagtacattgaggcagccgcaaagactggacaaattaag
gaggttgaacgtgtaacaagggaatcaaatttctatgatgctgaaaaagccaagaacttc
ttaatggaagccaagcttcctgatgcaaggccattaatcaatgtgtgtgaccgttttggc
tttgttcctgatctcactcactacctctataccaacaacatgcttcgctatattgaaggt
tatgttcaaaaggttaaccctggaaatgctccacaagttgtaggacagcttcttgatgat
gaatgccctgaagatttcattaaaggtctgatcctatcagttcgctctctgcttccagtt
gagcctcttgttgatgagtgtgaaaagaggaatcgtcttcgattactaactcagtttttg
gagcatcttgtaagtgaaggaagccaagatgtccatgtccataatgctttgggtaagatt
attatagatagcaacaacaacccagagcacttccttaccaccaacccatattatgattca
cgtgttgtggggaaatactgtgagaagcgtgatcccacacttgccgtcgttgcgtaccgc
agagggcaatgtgatgatgaacttatcaatgtaacaaacaaaaattctctgttcaagttg
caagcaaggtatgttgtggagagaatggatggtgatctttgggagaaagctcttaacccg
gagaatgaatatcgaaggcagctcattgatcaagttgtttctactgctttgcctgagagc
aagagccccgagcaggtttctgctgctgttaaagctttcatgactgccgatcttcctcat
gaactaattgagctccttgagaaaattgttctccaaaattctgctttcagtggcaatttc
aatcttcaaaacttgcttatcttgacagccattaaggcagacccatcacgagttatggat
tacatcaataggctagacaattttgatggacctgctgttggtgaggtggctgtagaagca
cagctttatgaagaggcgtttgcaatatttaaaaagtttaacttaaatgttcaagcagtc
gatgttttgctggataatatccaaagcattccacgagctgttgaatttgcataccgtgtt
gaagaagatgctgtctggagtcaggtggctaaagctcaactcagagaaggactagtgagt
gatgctatagaatcatttattcgtgctgatgatgctactcatttcttggatgttattcgt
gctgctgaggacacagaatgttaccatgatctggtgaagtatcttctgatggtgagagac
aagaccaaagagccaaaggtggatagcgagctcatttatgcatatgcaaagattgataga
ttaagcgacatcgaggaatttatccttatgccgaatgttgctaatcttcataatgttggt
gatcgtttgtttgatgaagccttgtatgaagctgccaagatcatatatgctttcatatcc
aactgggctaagctggctgttacacttgtgaggctccaacagtttcaaggtgctgtggat
gcagctcgtaaagcaaacagtgctaagacgtggaaagaagtttgctttgcttgtgttgat
gccgaggagttccgtttggctcaaatatgtgggctcaatattatagtccaggtggatgat
ctggaagaggtcagcgaatactaccaaaacagaggatgtttcaatgagttgatatctcta
atggagagtggtttagggttggaacgggctcatatggggatcttcactgagttgggtgtt
ctctatgctagatatcgtcatgagaagttgatggagcatataaaactcttttcaacacgt
cttaacattccaaagttaattcgtgcttgtgatgaacaacaacactggaaggaacttacc
tatttatatattcaatatgacgagtttgacaacgctgccagcactgtcatgaatcattct
ccggaagcttgggatcatatgcaatttaaggacattgcagttaaagtggcaaatgttgaa
ctctattacaaggctgtttacttctatttagaagaacaccccgaccttatcaatgacgtt
ctcaatgtccttgcgctacgtgttgaccacacacgtgttgtggacatcatgcgtaaggcg
ggtcaacttcctcttgtgaaaccatacatggttgcagttcagagtaataatgtatctgct
gtgaatgaggcactgaatgaaatatatgttgaggaggaagattatgatagattacgtgaa
tctattgatttgcatgataactttgaccagattgggcttgcacagaagattgagaaacac
gaacttcttgagatgagacgcgtagctgcatatatctataagaaggccggtagatggaaa
cagtctattgctctgtcaaagaaagacaaggtttacaaagatgcaatggagactgcctca
caatccggggatcgtgaacttgctgaagagttgcttgtttatttcattgagcagggaaag
aaggaatgctttgcttcatgtctgtttgtttgttacgatctgattcgcccagatgttgct
cttgagctagcatggttgaacaatatgattgattttgccttcccatatctgcttcagttt
atccgtgaatatactggtaaggttgatgaacttatcaaggacaagatagaatcaataaag
gaaagcaaggcaaaggagaacgaggagcaggacattgttaaacaacagaatatgtatgct
cagctactccctcttgcactacctgctccaccgggtatgggtggcagccaaatgggtgga
ggatatggtccaccaccacccatgggcggaatggggatgccaccaatgccaccatttggg
atgccgccaatgggctcttattga
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integrated database retrieval system
