Erigeron canadensis (horseweed): 122587380
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Entry
122587380 CDS
T07610
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 6-like
KO
K11843
ubiquitin carboxyl-terminal hydrolase 14 [EC:
3.4.19.12
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecad01002
]
122587380
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122587380
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122587380
Peptidases and inhibitors [BR:
ecad01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122587380
Ubiquitin system [BR:
ecad04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122587380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
ubiquitin
Peptidase_C98
Motif
Other DBs
NCBI-GeneID:
122587380
NCBI-ProteinID:
XP_043615465
LinkDB
All DBs
Position
2:45850091..45857685
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AA seq
483 aa
AA seq
DB search
MPTVSVKWQKELYPAVEIDTTQPPYVFKCQLYDLTGVPPERQKIMMKGHGLLKDDSDWSK
LGVKEGQKIMMMGTADEIVKAPEKGPVFMEDLPEEEQAVAVGHSAGLFNLGNTCYMNSTM
QCLHSVPELKSALIDYPQAGRSGDLDQSSHLLTVATRDLFSELDKNVKPVAPMQFWMVLR
KKYPQFGQLHNGSFMQQDAEECWTQILYTLSQALRSPNSSVNHDTVKELFGIDLVSRVHC
AESGEDSSETESIYALKCHISHEVNHLHEGLKHGLKSELEKASPSLGRSAVYVKDSRING
LPKYLTIQFVRFFWKRESNQKAKILRKVDYPLELDIFDLCSDDLRKKLEAPRQKLRDEDG
RKAGLKLKEKKSASVDNDVKMSDAEPSNASEESSKATPVEGLASDKNEQLTGVYDLVAVL
THKGRSADSGHYVAWVKQENGKWIQFDDDNPIPQKEEDITKLSGGGDWHMAYICMYKART
IAM
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgccgacagtgagtgtaaaatggcaaaaagagctatacccggcagtggagatagataca
acccagcctccatatgttttcaagtgtcagctgtatgatctcacaggggtaccacctgaa
agacaaaagataatgatgaagggtcatggattactaaaggatgactctgattggtcgaag
ttgggggtgaaagagggtcaaaaaataatgatgatgggaactgctgatgagatcgtaaag
gctccagagaagggccctgtttttatggaagatcttccagaagaagaacaggcagttgct
gtgggtcattcagctggattatttaacctggggaatacttgttacatgaattccaccatg
caatgcctgcattctgtcccagagcttaaatctgcattgatcgactatccacaggctggt
agaagtggtgatttggatcagtcttctcatctattgactgttgcgacacgagacttattt
agtgagcttgacaagaatgtcaagccagttgcaccaatgcagttttggatggtattgcgg
aaaaagtaccctcaatttggtcagctgcataatgggtccttcatgcaacaggatgctgaa
gaatgttggacgcagattttgtatactctttctcaggcccttagatcaccaaattccagt
gtgaatcatgatacagtgaaggaactttttggcattgaccttgtcagcagggtgcattgt
gcagaaagtggtgaagatagttcagagacagaatcaatatacgctcttaaatgccacata
tcgcatgaagtgaatcacttgcatgaggggctaaagcatgggctgaaatcagagctagaa
aaggcttctccttctctaggacgcagtgccgtttatgtgaaggattcccgcatcaatgga
ttgccaaagtacttgactattcagtttgttcgatttttctggaagagggaatctaatcag
aaagcaaagattttgaggaaagtggattatccattggagctggatatctttgatctttgt
tcagacgaccttcgaaaaaagctggaagctcctcgtcagaaattaagagatgaggatggt
agaaaggctggtttgaaactcaaagaaaagaaatctgcttcggtggacaatgatgttaag
atgtcggatgcggagccatcaaatgcaagcgaagaatcatctaaagccactcctgtggaa
ggtctcgcatctgataaaaatgagcagttgactggagtgtatgatttggtagccgttttg
actcataaaggccgaagtgcagattcaggtcattatgttgcttgggtcaagcaagaaaac
ggcaaatggattcaattcgatgatgataatccaatcccacaaaaggaagaagatataaca
aaactttctggaggaggtgattggcatatggcttacatttgcatgtacaaggctcgtacc
attgccatgtaa
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