Erigeron canadensis (horseweed): 122587429
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Entry
122587429 CDS
T07610
Name
(RefSeq) E3 ubiquitin-protein ligase SIS3-like
KO
K16284
E3 ubiquitin-protein ligase SIS3 [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122587429
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122587429
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122587429
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-RING_4
zf-C3HC4_4
FANCL_C
Motif
Other DBs
NCBI-GeneID:
122587429
NCBI-ProteinID:
XP_043615529
LinkDB
All DBs
Position
2:42124098..42127287
Genome browser
AA seq
363 aa
AA seq
DB search
MSIKGVDLKWYDGFFLSMLATSIIIIVINWKHYNQCKHPLNIWIVVDYTTVFVFRLLMFV
DNGLAAGMGLDYGPQQRHARFCGRVVVLSILSAVLYPFLWAWTVIGSLWFSSSRDCLSEE
GQKWGFFLWLLFSYCGLVCLAGMSMKMWLRRRHALSLRAQQGISISEYGVLVDLIRVPDW
AFENAAGQEMRGMGQDAGSYHPGLYLTDAEREAVEALIQELPKFLLIAVPTDCSECPICL
EEFHVGNEVRGLPCAHNFHVGCIDEWLKLNVKCPRCRSSVFPNLDLSALSTIPADPQEST
LATTRYVRSQPSSQSYLMRMQGFLQPVLAGNASSGSDNSLETVENGRQPPESQNVHIVVE
PGR
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatcaaaggcgttgatctcaaatggtatgatgggttcttcctatcgatgcttgcc
actagcataattattatagtgattaattggaagcattacaatcaatgtaagcatccattg
aatatttggatagtggttgattatacaacggtttttgtgttccggctactgatgtttgtg
gacaatggacttgctgcaggaatgggattggactatgggcctcagcagagacatgctcgt
ttttgtggaagagtggtggttttgtctattctcagtgcggtgctttatccttttctctgg
gcatggactgttattggatccttatggtttagtagctcaagagactgtctttctgaagaa
ggtcagaaatggggtttctttttatggctgcttttcagttactgtggacttgtttgcctt
gctggaatgtctatgaaaatgtggttgaggagaagacacgctctttcactacgtgctcag
cagggaatttctatatcagaatacggggttttggttgacctgatccgggtaccagattgg
gcatttgaaaatgctgctgggcaagagatgagaggtatgggtcaagatgcagggtcgtat
catccgggactttacttgactgatgccgagagagaagcagtggaggcactcatccaagaa
cttccaaaattcttgcttatagctgtccctactgattgtagcgagtgtccaatttgcttg
gaagaattccatgttgggaatgaggtccgtgggcttccttgtgcgcataacttccatgtg
ggctgcatcgacgaatggcttaaattgaatgtgaaatgtcctcgatgtagatcttctgtg
ttcccaaacctcgaccttagtgcactttccactatccctgcagaccctcaggagtcaact
cttgcaacaactcgttacgtgaggagtcaaccatctagtcagagttatctaatgcgaatg
cagggtttcctccagcctgttctcgctggaaatgcaagttcaggttctgataactcatta
gaaactgtagaaaatggaagacaaccacctgaaagtcaaaatgtccacatagttgtggag
cctggacgctaa
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