Erigeron canadensis (horseweed): 122587454
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Entry
122587454 CDS
T07610
Name
(RefSeq) uncharacterized protein LOC122587454 isoform X1
KO
K17925
sorting nexin-13
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ecad04990
]
122587454
Domain-containing proteins not elsewhere classified [BR:
ecad04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
122587454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
V18-19
Motif
Other DBs
NCBI-GeneID:
122587454
NCBI-ProteinID:
XP_043615563
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All DBs
Position
2:complement(45149034..45158079)
Genome browser
AA seq
1066 aa
AA seq
DB search
MSTATAGKQMVSLRDLIDEAKKRIVFVSVCVVGLSYLMSLTSASVLINLPAALLLIICFR
YLTLDYDMKRKAASYNSNPSSANLLFQKKAVVEPKFLSGKSEWRRKVNSPVVEDAIDQFT
KHLVSEWVTDLWYSRITPDKQGPDELVLIINGVLGEFSSRMRNINLIDFLTRDIIKLFCT
HLELFRACQVKIMKQQSLTIAQRDVELKAVLYAENKLHPALFSSGAEYKVLQHLMDGFIS
FAFRPEDLQCSLFRFIVREILACTVIRPVVNLANPRFINERIENVVISASKTDKGANTEQ
VNSPSEPNGSPKMSSQLSMSIDPSVKGFELTQLKKENPDSAEDNVTNTLHSKDPLLSIDT
RKQLSGGEWGGKLDMISHRKTAALAPENFENMWAKGRNYKTKDNVSRITDLVHQPSSARS
ANLVNHSKPLTSHKETYGLPRGDHKSLCPPMGTSYEEDEDGNEEEYINSSDYSSEDEENS
DIMGLNSPGTKVWDGKSNRNHSVTHIHHPLESYEGQKPRRKSEKGNSNGRKRSRVSSQKE
VWQEIERKSFLLRDGLDVLGSSKGNSKSGDSSGDSEGGESLGRTNSGASASSSFPALSAI
NPPKFSPLDNFFRLRCEVLGANIVKSGSKTFAVYPISVTDMNNVSWSIKRRFRHFEELHR
RLKEYPEYNLHLPPKHFLSTGLDVDVIHERCKLLDIYLKRLMQFPTISGSIEVWDFLSVD
SQTYSFSNSISIIETLSVDTAPAAREKSTDFGNTANRSVVDPLISRREQSDSVIKNYLSE
VKHNSMIDGSKVVKRNVAASLGKPVKEVGKSSEDSDSDPEIVVSNIMSSTGKSGQSLHTP
SVMLTDDGESVLPSEWVPPNLSIPMLDLVDVVFQLQDGGWIRRKAFWVVKQVLQLGMSDA
FDDWLIAKIQLLRRGSIVASGIKRLEQILWPDGIFLTKHRKRQQPTPSQSVPQDLPNGGP
SSPGYRHSDEETLTREELQEREAQRRSKLVYELMIDKAPATVVSLFGRKEYEQCAKDVYY
FIQSSVCLKQLSFDLLELLLLSTFPEMESVFQQLHDEKQKFGVLEQ
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgagtacggcaacagcaggcaagcaaatggtgtcgttacgagaccttatcgacgaggcg
aagaaacggattgttttcgtttccgtgtgtgttgttggactctcgtatcttatgtctctg
acaagcgcgtcagtgttgataaacttgcctgctgcgctccttttaattatttgctttcgt
tatttaacgttggattatgacatgaagaggaaagctgcatcatataacagcaacccatca
tcggccaatcttctttttcaaaagaaagcagttgtagagccaaagtttctatcaggaaaa
tccgagtggagaagaaaagtcaattctcctgttgttgaggatgcaatagatcagttcaca
aaacatttagtttctgagtgggtcactgatttgtggtactcccgaattacgcctgacaaa
caaggtccagatgagttggtgctgatcataaatggtgtcttgggggagttctctagccgc
atgcgaaacatcaaccttattgacttcttgacaagggacattatcaaacttttttgcacc
cacttggaacttttccgtgcatgtcaggtgaagattatgaagcagcagtctctgacaatt
gcacaacgagacgtggaactcaaagctgtgctgtatgcagagaataagttacaccctgct
ttattttcttctggagccgagtacaaggttttacagcatcttatggatggtttcatctct
ttcgcgttcaggcctgaggatctgcagtgttctttatttcgtttcatagtcagggaaatt
ctcgcgtgtacagttatacggcctgttgtcaatttagctaacccaagattcattaatgag
agaattgagaatgtagtcatttcggcaagcaagactgacaaaggagctaacacagaacaa
gtgaactcgccgtctgagccgaatggatctccgaaaatgtctagtcaactatctatgtct
atagatccttctgttaaaggttttgagctcacacagttaaaaaaggaaaatcctgattct
gctgaagacaatgtcaccaacactcttcattcaaaggacccattactttccatcgatacc
cgaaaacagctttcaggtggagaatggggtggcaaattagacatgatttcccacagaaaa
acagcagcattagctcctgaaaattttgagaatatgtgggctaaaggtagaaactacaaa
acaaaagacaatgtgagccgtatcacagatctggtccaccaaccttcttctgctaggtca
gcaaatttagttaatcactcaaaaccattgacatcacacaaagagacatatggcctcccc
agaggtgatcataaaagtttatgcccccctatgggcacgtcttatgaggaggatgaagat
ggaaatgaggaagaatatataaatagcagcgattattctagtgaagatgaagagaatagt
gacatcatgggtttaaattctccaggaacgaaggtttgggacggtaaaagtaatcggaac
cattccgttactcacattcatcatccgcttgaaagttatgaaggccagaaacctaggaga
aaatcagaaaaagggaattccaacgggagaaaaagatcaagagtgagcagtcagaaggag
gtgtggcaggagattgaaaggaagagtttcttgttgcgagatggactggatgtgctgggt
tcttctaaaggaaattcgaagtccggggactctagtggtgactctgaggggggagagtcg
ttgggaagaaccaatagtggggcaagtgcttcgtcttctttccctgcgctttcagccatt
aatcccccaaaattttcacctttggataatttttttagactacgatgtgaggttttaggt
gccaatattgtgaagagtggctctaagacttttgctgtctatcccatatctgttacagac
atgaacaacgttagctggtctattaaaagaaggtttcggcattttgaggagctacaccgg
cgtctcaaggagtatccagagtataatcttcatctcccaccaaagcactttctgtcaaca
ggactcgatgtggatgtcattcatgaacgttgtaaacttcttgatatatatttgaagaga
cttatgcagtttccaactatatctggatcaattgaagtctgggactttcttagtgttgat
tctcagacatatagtttctcaaattctatttccatcatagaaacgctgtcagttgataca
gccccagctgctcgtgaaaagagtacagattttggtaatactgctaataggtctgtagtg
gaccccttaatttctagaagagaacaatcagatagtgtgattaaaaattatttatcagaa
gtcaaacataattctatgatcgatgggtcaaaagtagtcaagagaaatgtagcggcttct
cttggaaagcctgtaaaggaagtcggaaagtcatcagaggattctgacagcgaccctgaa
attgttgtttcaaatattatgtcttcaactggaaagtccgggcagtctttgcatacacca
tctgtgatgcttacagatgatggtgaatcagtactacccagtgagtgggtgccaccaaat
ttgagtatcccaatgttagatcttgttgatgttgttttccagcttcaggatgggggttgg
atcaggaggaaggccttctgggtggtcaagcaggttctacagctgggcatgtcagatgcc
tttgatgattggctaattgctaaaattcaactcttacgtaggggctctattgttgcttca
ggaatcaagcggcttgagcagatactttggccggatggtatatttttaacaaagcaccga
aagcggcagcagccaaccccctcacagagtgtgccacaggatttacctaatggcggacct
tcatcaccaggataccgacacagtgatgaggaaacgttgacaagagaagagcttcaagaa
cgagaagctcaaagacgttctaagctagtttatgagctaatgattgataaagcaccagca
acggtggtaagtctttttggtcgaaaggagtatgaacagtgtgcgaaagatgtctattac
tttattcagtcatctgtttgtctaaagcaattatcttttgaccttcttgagctgctgctg
ttgtccacttttccggagatggaatctgtattccaacaattgcacgatgaaaagcaaaag
tttggagttcttgaacagtaa
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