Erigeron canadensis (horseweed): 122587720
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Entry
122587720 CDS
T07610
Name
(RefSeq) ribonuclease TUDOR 1-like isoform X1
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
ecad
Erigeron canadensis (horseweed)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNase
RFX5_N
Motif
Other DBs
NCBI-GeneID:
122587720
NCBI-ProteinID:
XP_043615819
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Position
2:39555628..39565828
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AA seq
707 aa
AA seq
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MAAASSCSGEWFRGRVKAVLSGDTLVVMGLAEEIPPETTIVLAHLLAPRLANREGKDQPF
AWKSREFLRKLCIGEVVVFKTVYTIPNTNREFCSVLLDDSTNIAEEVVQGGWAKVKEARG
RRVTRMHAELLHLEQIAKINGKGLWDKSPRAIAAAVRNLAPSAVANPWNLKAKDLGADKN
KLEAIVEHVRDGSCLYVYLQLPSGAFQFVKVFVAGIQAASMGRRNNNNNDESKSTSSTEN
EVSPEYGWEAKHYTEIRVLSRVVRIASKGFDKYGCLVGTVYYPAGTEEKNLALELIKNGF
AKYVDWSASKMDVEAQKELKAAELEAKNNKLKMWTNYVPPSPRSQKPSPKAVSNNLRATK
PKAVSKNFTGQVTEVVSGDCIIVADDSVPFGSPGAERRINLSCIKCPNMANPDEKSEPYA
REARELLRRRLIGRQVQVSMEYVPTANGSTDQNGTTETQVFLLSQGKDSEDVSPAAGGQE
PGLNVAQLIISRGFGTVVKYRDNNKERSHYYKKLLEEESGAVTRGKGIHSFKIPPVMHVT
DLTTASQKAKEYLPTLQRNKRMAAIVEHVLSGYRYKIFVPKDACSIVFSLSGVKCPVRKE
PYSDEAMSLMRRKLMQRDVEIEVETVRNGAFVGCLWESNTNAGVTLLEAGLARLQTSFEA
NKITDGRLLAEAEQLARKQKLKIWSDVNSEADEKDLSANGVTSKAKT
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcaagttcttgttctggcgagtggtttagaggccgagtgaaggccgtctta
tccggtgatacattggtggttatgggacttgcagaggaaatcccgccagagacgactatc
gttttagctcatcttctcgcgccacgattggcgaatagagaaggcaaggaccaaccgttt
gcatggaagagcagagaattcttgcgaaagttgtgtataggagaggttgtcgtgttcaaa
accgtatacactatcccaaataccaacagagaattttgcagcgtcctccttgatgattcg
acaaatattgctgaggaagttgttcaaggtggttgggccaaggttaaagaggctagaggg
cgacgggtgactcgtatgcatgctgaattgttacaccttgaacaaatagccaagatcaac
ggcaagggcctatgggacaagtctcctcgtgctattgcagctgccgttaggaaccttgca
ccttcagccgttgccaatccatggaatttgaaagcaaaggacctcggtgcagataaaaac
aaattggaagcaattgttgagcatgttcgtgacgggagctgtctttatgtttatttgcag
ctgccatcaggagcctttcagtttgttaaagtgtttgttgctggaatccaggccgcgtca
atggggagaaggaataataataataatgatgaatctaaatctacatcatcaactgagaat
gaagtatcccctgagtatggatgggaagctaaacattataccgagattcgtgtactaagt
cgagttgttcggattgcctctaagggttttgacaagtatggctgcttggttggtaccgtg
tactatcctgctggtacagaagagaaaaaccttgcacttgagcttattaaaaatgggttt
gccaagtatgtcgactggagtgcaagtaagatggacgttgaggcccagaaggagttgaag
gctgcagaacttgaagcaaagaacaataagttgaagatgtggacaaactatgttccacca
tcacctaggagtcaaaagccaagtccgaaggcagtttcaaacaacttgagagctacgaag
ccaaaggcagtctcaaagaactttactggacaggtaactgaagttgttagtggggactgc
atcatcgttgcggatgattctgtaccctttggcagcccaggcgccgagaggagaataaac
ctgtcttgcataaaatgtcccaatatggcaaatccggatgaaaagtctgaaccttatgct
cgtgaagctagggaacttctgagaagaaggttaatcggccgtcaagttcaagtttcaatg
gaatacgtccccacagccaatggatccactgatcaaaatgggacaacagaaacacaagtt
ttcttgttgtctcaagggaaggacagtgaagatgtatccccagcagcaggtggtcaggag
cctggtctaaatgttgctcaacttattatttctcgtggttttggcactgtcgttaaatat
agagataataacaaggaaagatcgcactattacaagaaacttcttgaagaggagtcgggg
gctgtaactcgcgggaagggtattcattcttttaaaattcctccggttatgcatgttaca
gatctaacaacggcatcccagaaagccaaagagtatctgccaactttgcaacgtaacaag
aggatggctgctatcgttgaacatgtactaagtggttaccgatataaaatttttgtacca
aaggacgcgtgcagcattgttttctcattatctggtgttaaatgccccgttaggaaggag
ccttattctgatgaagctatgtcactaatgagaaggaaacttatgcaaagggatgtagag
attgaagtagaaacggttagaaatggggctttcgtgggttgtttatgggaatcaaatacg
aatgccggtgtcacccttttggaagccggtcttgcaaggcttcagacttcctttgaagca
aataagattacagatggtcgccttcttgctgaagcagagcagctcgcgagaaaacagaaa
ctcaagatatggagtgatgtaaattcagaagcagatgagaaggatttgtctgcaaacggt
gtgacttcaaaggctaaaacctga
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