Erigeron canadensis (horseweed): 122587896
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Entry
122587896 CDS
T07610
Name
(RefSeq) RING-H2 finger protein ATL38-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122587896
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122587896
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
122587896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-C3HC4
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-Nse
Prok-RING_1
zf-RING_16
RINGv
Zn_ribbon_RlmA
PHD_NSD
DUF1272
DUF5676
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
122587896
NCBI-ProteinID:
XP_043615986
LinkDB
All DBs
Position
2:complement(23218247..23219359)
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AA seq
370 aa
AA seq
DB search
MQVLIFDNDVKWHIFIILVLLSSYNHAIAEEESSSTLVPTTTPVAENNGMNYDPTMAIVL
VSLLSAFFMICVITAYFRHYTEQQLRLAASTTHGSETGSMRSVVHGLDPAVLATFASFSY
SSVKGIKLGQTVLECAVCLNEFQDHETLRLLPMCSHVFHRECIDTWLAAHVTCPVCRADL
VLRPGELSELTESLHCPLEREIDFASTEFLLPVEAKHDIHPTTEMPRSHSTGHLVRPVEN
TERYTLRLPNEALALFMNMVTSLPTSPHPAFPMESSEKMTFRSISVGSTRRLDYSHYAKS
NSRRLEGETSRAASTSESHANNGNDFTRTSNSHRFFRSVRSPFDRFFRRSNRNFDAGERL
RDQVASDVEV
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtcctcatatttgataatgatgtcaaatggcatatctttattatacttgtgtta
ctctcatcttataatcatgctattgcggaagaagaaagttcatcaacactggtaccaacg
acgacgccagttgctgaaaataacggtatgaattatgacccgacaatggccattgttttg
gtgtcgcttttaagcgcatttttcatgatttgcgtgatcacggcgtattttcgccattac
acagaacaacagctcagacttgcagcaagtacgacacatgggagtgaaaccgggtctatg
agatccgtggtccatgggcttgacccggctgtgcttgccacattcgctagtttttcgtat
tcaagtgtcaagggaataaagttgggacaaacggtactagaatgcgccgtgtgtttaaat
gagttccaagaccatgaaactctacgtttgctaccgatgtgtagccatgtgttccatcgc
gagtgtattgacacttggttggctgcacatgtcacttgcccagtgtgtcgggctgatctt
gtactccgacccggtgaacttagtgagttaaccgagtcactacattgccccctagaacgt
gagatagattttgcctcgactgagtttctactcccagtcgaggcaaaacatgatatacat
cctaccacagaaatgccacgttcccattcaacgggccatttagtcaggcccgttgagaat
actgaaaggtatactctacggttaccaaacgaagcactagccctttttatgaacatggtc
acgagcctgcctacgagcccacatccagcatttcctatggaaagtagcgaaaagatgacc
tttagaagtattagcgttggttctactcgaagacttgattattctcactatgcaaagtct
aactctcgaagactagaaggggaaacgtcgagggccgcctctactagtgaatctcacgcc
aacaatggaaatgacttcacgaggacttcaaattcacatcggttttttagatccgttaga
tcaccttttgaccgcttctttcgacgatcaaataggaattttgatgccggcgaacgattg
agggatcaagtagcatcagatgtcgaagtgtag
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