Erigeron canadensis (horseweed): 122588008
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Entry
122588008 CDS
T07610
Name
(RefSeq) ATP-dependent DNA helicase SRS2-like protein At4g25120
Organism
ecad
Erigeron canadensis (horseweed)
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
Motif
Other DBs
NCBI-GeneID:
122588008
NCBI-ProteinID:
XP_043616091
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Position
2:27621751..27631059
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AA seq
1216 aa
AA seq
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MNKENEGYGELSDEQRARISRNFRAAKALLHRKRCRDTSDSFPQKNGTRPSGVGSVTRVP
FSDISSNTSNVVAGSVNRMPLSDISSNTPLSVRNCTKVLHNENGISHSSFKTPEKQLGYS
GNSCLSKVSVSSIDLSSGVEALDEIEPSLDSFKTPTKLLDFTVSSEVEKKDFCDNFNGDM
SMGALMENDVGSSAFVTPIRQQSCSSVNEPLTVMPTIFYEEFDDAILAEIDEICESGIKS
NMTVEESSRDIMLKSVHTKMNSSEFRSDLGPAVLDNIQTDNSTDGSSGNESGKQESGSSE
DSEIGGMPDEYAKYMQSLNDRQREAACSDITMPLMIVAGPGSGKTSTMVGRVLMLLHKGI
QASHILAMTFTTAAASEMRDRIGAVAGKAVAKELMISTFHSFSLQFCRLHAEKVGRTPDF
LLYGQGQQRKAVVEAVRLTESGKKLSTSDSDKLSEVSNVSKNGPEDFREKSKKWLKFVAQ
AKSSGKTSKDYQRLGNEIGAAILRKYEDILASCNALDYHDLISCSVKLLSEFPEVSKECQ
ETWQAIVIDEFQDTSTMQYDLLRTLASHKRITIVGDEDQSIFSFNGADVSGFKSFRRDLQ
PHKEIRLNKNYRSTRCIVEAASFLIRNNSKRCQSSKVLTDNSSGSKITVKECYNEDAQCS
FVVDKILELTSLSSSVKGTFGEIAILYRRQVSGKTFQTAFRDRKIPFNVHGVAFYRKKVV
RVIISMLRTTLAVCDDGSFRRVFKALLLLEKDEIKRIIEHINKISSVRKCSFISAASDIF
GAKISGTFKRSHLTQGRKVLGTLDIISNLVHREQSISAVITSVANMIPQKYLLEQRAVLD
VDGGKLLNEEHDLRSVLQYLLDDASDFLKSYNFDIDENNKDTAEKGCVIILKEFIDFITE
RETENFRVRRHDNSHAVTLTTIHQSKGLEWDTVFIVKANENEIPLLHEFNGVTKETCASV
EEERRLLYVALTRARKKLFILYVTMDSHWQVLQPSRFLNEIPRHLLEIQDELGSGYLQAE
QQELLNKTSCLNDYRKATKHAMIITETDETFNNIPGDDSKDPYETILPCNGNDFLKRFSS
EERATVSHLFNHWAKKAAFKEPKRLLDKVAFVIDERLRAKKTAQKDVLRTLKSCLKSNEA
FQYAENVLQWLRIPADKRAFITKEKQEHFQKLRIESAMGSSSATSKQIAYLQSLGCTTIP
DSRLHASRLIEQYKKL
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagaaaatgagggttatggagaattatcagatgaacaaagggctcggatttct
cgaaacttcagagccgccaaagctttactccatcgaaagcgttgtcgcgatacttccgat
tcatttcctcaaaaaaatgggactagaccatctggtgttggaagtgttactagagtcccg
ttttcagatatttcgtcaaatacttctaatgtggttgctggaagtgttaatagaatgcca
ctttcagacatttcatccaacactccgctttcagttagaaattgtacaaaggttttgcac
aatgagaatggaatctctcatagttcatttaaaactccagaaaaacagttaggttatagt
gggaactcatgtttgagtaaagtttctgtaagcagtattgacttaagttctggtgtcgag
gctctggatgagatagaacctagtttggattcgttcaagactccaaccaagctgttagat
tttactgtaagtagtgaagttgaaaaaaaggatttttgtgataattttaatggtgatatg
agcatgggtgccttaatggaaaatgatgttggttcatcagcatttgtaactccgatcaga
caacagtcttgttctagtgttaacgagcctttgacagtgatgccaaccattttctatgaa
gagtttgatgatgccattttagccgaaattgatgaaatatgcgagtctgggataaagtca
aatatgacagttgaggagtctagccgtgacattatgttgaagagtgtgcatactaaaatg
aatagttctgaatttagaagtgatttgggtcctgctgttttggataacatacaaactgat
aatagtacggatggaagtagtggcaatgaatctgggaaacaagagtctgggagttctgag
gattcggaaatcggaggcatgcctgatgagtacgcaaaatatatgcagtctttaaatgat
agacaacgtgaagcagcctgcagtgacattacaatgcctttgatgattgttgcaggtccc
ggaagtggtaagacgtctaccatggtcggccgagttttaatgcttcttcataagggcatt
caagcatcccacatattggctatgactttcaccactgctgccgcttcagaaatgcgagac
agaatcggagcagtggctggaaaggcagtagcaaaggaactcatgatcagcaccttccat
tcattctcattgcaattctgtcgtttacatgctgagaaggtaggccgtacaccagacttt
ttgctatatggtcaaggacaacaaaggaaggcggtcgttgaagcagtgcggctcactgaa
agtggaaagaaactatcgacatcggattctgacaaactctctgaggtctctaatgtctct
aaaaatggcccagaagactttagagagaagtcaaagaagtggttaaaatttgtggcacaa
gctaaatcttctgggaaaacctctaaagattaccagaggttgggaaatgagattggagct
gcaattcttaggaaatacgaggacatacttgcatcatgtaatgcgttggattatcacgac
ttaattagctgctctgtcaagctgcttagcgaatttcccgaagtgtctaaggagtgtcag
gagacatggcaagcaattgtaatagatgaattccaagacacaagtactatgcaatacgat
ttattgcgaactcttgcatcacataagcgcataacaattgttggagacgaggaccagtca
atcttcagtttcaatggtgcagacgttagtggatttaagtcatttcgcagagatttgcag
cctcacaaggagatcagattaaataaaaactatcgttctacccgttgtattgttgaggct
gcatcgttccttatacgaaataattcaaaacgatgtcagtcaagcaaggttcttactgac
aattcttctggttccaagattactgtcaaagaatgttataacgaggacgcacagtgttca
tttgttgttgataagatactagaactcacatctttgagttcatctgtcaaaggcacgttt
ggagagattgctattctttaccggagacaggtgtcgggtaagacatttcaaacagccttc
cgtgatagaaaaatcccgtttaatgttcatggagtcgctttttacaggaaaaaggtagtt
agggtcatcatatctatgctcagaacaacattggcggtgtgtgatgatgggtcatttagg
cgagtgtttaaggccctcctgcttctagagaaagacgaaataaagaggataattgagcat
attaataaaatctcatctgtaagaaaatgcagcttcatatctgctgcttccgatatattt
ggtgcaaagatctccggtacctttaaaaggagtcatctcacccaaggacgtaaggttttg
ggtactctggacattatttcaaatcttgttcacagggaacaatccatttcagccgtcatc
acatcagtggcaaacatgatacctcagaagtaccttcttgaacaacgggctgttcttgat
gttgacggagggaagttgctaaacgaagaacatgatcttagatcggttcttcaatatcta
ctggatgatgcctctgattttttaaaatcctacaactttgatatagatgagaataataaa
gacacggcagaaaaagggtgtgtaattatacttaaagagttcatagattttattactgaa
agagaaacagaaaattttcgtgtgaggcggcatgataatagtcatgctgttactcttaca
accattcatcagtccaaaggattagagtgggacactgtcttcattgtaaaggcaaatgaa
aatgagatcccccttttgcatgaatttaatggcgtcacgaaagaaacctgtgcctctgtt
gaggaggaacgccgcttgctatatgtggcattaactcgtgcaaggaaaaaactttttatt
ctatatgtcactatggattcacattggcaggttctgcaaccttcacgtttcttaaacgag
attccaaggcatcttcttgaaatccaggatgagctgggttcagggtatttgcaagcagag
caacaggaacttctaaataaaacttcatgtcttaatgattaccggaaagccacaaaacat
gctatgataataacagaaacagatgaaactttcaacaatatacctggtgatgattccaaa
gatccatatgaaactatcttgccatgcaatgggaatgatttcttgaaaagatttagtagc
gaagaacgagcaactgtatcccatttatttaatcattgggcgaagaaggcagctttcaag
gaaccaaagaggttgcttgataaggttgcctttgttattgatgaaaggcttagagcaaaa
aaaactgctcaaaaggacgttcttcggactctgaagtcatgcttgaagagcaacgaagca
tttcagtatgctgaaaatgttctacagtggttaagaattcctgcagacaagcgtgcgttt
attacaaaggaaaagcaggaacatttccaaaagttaaggattgaaagcgccatgggttca
tcctcagctacatctaagcagattgcatacttacaaagtctaggatgcactaccattcca
gattcacggcttcatgcatcccgtttgattgaacagtacaagaaattatag
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